Gene Daci_2277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2277 
Symbol 
ID5747840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2506410 
End bp2507252 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content49% 
IMG OID641297361 
Producthypothetical protein 
Protein accessionYP_001563302 
Protein GI160897720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00876567 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAGCT TCCCTGTTCT GAGCGACCAT GACTACTTGA ATTTTGTAGG TGCCATACGC 
CATCGTGGAG CCAACGAGTC CACACATGTT GCCGAGGTGC GTTATCCGGT GCAGCGTGCA
GGAGTGACCA GTGTGGTCAA GCTCATGCGA CCCGACGGTA TCGGTTTGTG CAATGAAGCG
ATTGCTTGGC TTTTTCTACG AGCGATTGGC TTGCCAGTGC CTCAGCATGC TGGAATTCTG
ATCATGACAG AGAAAAAGGC AAAAGCTGTC TTAGGGCGAA GTGCTGTACC GACTGAGTTG
GTGTCAGGCG GCTATGTTCT GGCTTGGGCA TCGCAGCAGC TTGCGTTTTC CAGTATTCGT
GCGCTCTTTT CGGGATGTGA AGGTGATGCG AAGTGGCTGG ACGTGTTGCG GACAGATACT
GGCGCCGCAA TCGCTGCGTT CGATGAGCTA TTTCACAATA TTGATCGTAA TCTGGGTAAT
GTGCTTTTCC ATGGAAAAGG AAGTTGCATT CCAATTGATC ATGAGCAGAT TTTTGCAGTT
CAAAATTGGA TCGCAGGAGA AATCCAACAA TTGGCTGGAA ACGGGGATTC GCTTCGCGCA
CTAAATAGGG CGCATACGGG GAAGAAATTG TCTACCTCCG ATTGGACACG CGTAAGAGAT
ACTATGGTTG CTTGCTCGCA GCATCATAAG GGGGCGCTGG ACGTATGCCG CGTTCAAGTT
TTGGAGCTAT TGACTACCTT GTTTAAAGGA GCTGGGTCAA TTTACGCAAA TAGGATTCTG
TCATTTGTTG ATTTGCGTTG TCAAGATAAT TGGATGCAGC AGCGAGTTGG AGCTTTGACA
TGA
 
Protein sequence
MSSFPVLSDH DYLNFVGAIR HRGANESTHV AEVRYPVQRA GVTSVVKLMR PDGIGLCNEA 
IAWLFLRAIG LPVPQHAGIL IMTEKKAKAV LGRSAVPTEL VSGGYVLAWA SQQLAFSSIR
ALFSGCEGDA KWLDVLRTDT GAAIAAFDEL FHNIDRNLGN VLFHGKGSCI PIDHEQIFAV
QNWIAGEIQQ LAGNGDSLRA LNRAHTGKKL STSDWTRVRD TMVACSQHHK GALDVCRVQV
LELLTTLFKG AGSIYANRIL SFVDLRCQDN WMQQRVGALT