Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2276 |
Symbol | |
ID | 5747839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2505611 |
End bp | 2506255 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641297360 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001563301 |
Protein GI | 160897719 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0220665 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTACAAG ACGCGGTGGA TTTTGCCCAA TTTTTTGGGA AAGTCAACAG ATTTACCAAA AAAATGGATG AATTTTCCCA AAGGTTGCGT GAGGAGCGCA AACGGCTTGG CCTAAGCCAA GAGGCGTTTG CATCCCTGGG CGGGGTGTCC AAGAACACTC AATCGAACTA CGAGACGGGG GCAAATCTGC CTGATGTTGG CTACCTCAAC ACCATTCGCG GGTTCGGGGT GGACTCCGGC TATGTGCTCA CGGGCATACG TACTTTTGAC CCCAGCGCGA TAGAGCATGC ACAGCCCGCT GCCACGCTTG CGGCCCGCCT GGTGCAAGAG CGCAAGCGGC TGGAGCTGAC CGTGGGCCAA CTGGCCGCCA AGTCGGGAGT GGATCGCCTG GCCCTGCTGA AATTTGAAGA AGGCGAGTTC GCGCCCGATG CCAAGGCACT GCAGCAGCTG CATGCCGTAG GCGTGGATGT TGGCTATGTG CTGCTGTCGC TGCGCGCAGG CGCGGCGGGC GGCGATGTTG GCGTGGCCGG CGCAGTCAGT GCTGACATTG AGGTGCTGAT GCAACATTAC GGCAAGGCCA CCGCAGAAGG CCAAGCTGCC ATAAGAACGG TAGCCTCACT GGCAGCACAG GCAGCTCGCG TGTAA
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Protein sequence | MLQDAVDFAQ FFGKVNRFTK KMDEFSQRLR EERKRLGLSQ EAFASLGGVS KNTQSNYETG ANLPDVGYLN TIRGFGVDSG YVLTGIRTFD PSAIEHAQPA ATLAARLVQE RKRLELTVGQ LAAKSGVDRL ALLKFEEGEF APDAKALQQL HAVGVDVGYV LLSLRAGAAG GDVGVAGAVS ADIEVLMQHY GKATAEGQAA IRTVASLAAQ AARV
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