Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2246 |
Symbol | |
ID | 5747809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2466495 |
End bp | 2467103 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641297330 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_001563271 |
Protein GI | 160897689 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.417251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0283707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCTT TGCTCAAATT CTCAAGGGGG GTCGACTGGC TCAACAGCCT GGTCGGGCGA TGGCTTATCT GGCTGATCCT GGCCTCCACG GTCATCAGCG GCATCAATGC CATCGTTCGC AAGGTGTTGC ACACCAGCTC GAACGCCTAC CTCGAAGTGC AGTGGTACCT GTTCGCGGCC TCCTTCCTGC TGGCCGCCGG CTACACGCTG CTGCAGGGCG AGCATGTGAA GGTGGATGTG ATCGCCAGCC GCCTGTCCAA GCGCACGCAG ATCTGGATCG ACATCTTCGG CTTCGTCTTC TTCCTGACCC CCATGGCGCT GGCCATCCTG TGGTTCGGCA CGCCCTTCGT GATCCAGGCC ATGCAGACCG GCGAGATGTC GGGCAACGCA GGCGGCCTGG TGCGCTGGCC CGTCTACCTG ATGATCCCCA TCGGCTTCGG GCTGCTGCTG CTGCAGGGCA TGTCGGAGCT GATCAAGCGC ATCGCCTTCC TGAAGGGCCT GATCGACGAT CCCACGGCCA AGAAGGGCGA GAAGACCGCC GAGGAAGACC TGGCCGAAGC ACTGCGCGGG CTGGCAGGTG CCAAGGACAA AAGCGGGCAA AGCGCCTGA
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Protein sequence | MQALLKFSRG VDWLNSLVGR WLIWLILAST VISGINAIVR KVLHTSSNAY LEVQWYLFAA SFLLAAGYTL LQGEHVKVDV IASRLSKRTQ IWIDIFGFVF FLTPMALAIL WFGTPFVIQA MQTGEMSGNA GGLVRWPVYL MIPIGFGLLL LQGMSELIKR IAFLKGLIDD PTAKKGEKTA EEDLAEALRG LAGAKDKSGQ SA
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