| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2244 |
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| Symbol | |
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| ID | 5747807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2463422 |
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| End bp | 2464501 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641297328 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001563269 |
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| Protein GI | 160897687 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.342958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0290816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGAA GAAAAGCACT CAAGCACGCC GGTCTGGCCG GTGTGTTGAC TGCCGCAGCG
GCACCCGCCG TTCACGCGCA GGCGGCAATA CGCTGGCGCC TGGCGTCGAG CTTCCCGCGC
TCGCTGGACA CCATCTACGG CTCGGCCGAG GTGTTTTCCA AGGCGATCAA GGAGATGTCG
GGCGGCAAGT TCGAGATCTC GGTGCATGCG GCCGGCGAGC TGATGCCCGC CTTCGGCGTG
GTCGATGGCG TGCAGAACGG CACGGTGGAG ATCGCGCACA CGGCGCCTTA CTACTTCTTT
GGCAAGAACG AGGCCTTTGC CATTGGCGGC GCCATTCCGT TCGGCATGAA CTCGCGCCAG
CTCACGGCGT GGATCGTGGA CGGCAACGGC GGCAAGCTGA TGCGCGAGTT CTATGCCGAA
TACGGCATCG TCAACTTCCT GGGCGGCAAC ACGGGCGCAC AGATGGGGGG CTGGTTCCGC
AAGGAGGTCA AGACACCCGA GGACATCAAG GGCCTGAAGT TCCGCATCGG CGGCTTCGCG
GGCCGGATCA TCGAGCGCAT GGGCGGCGTG CCCCAGAACA TCCCGGGCGG CGAAATCTAC
CAGGCGCTGG AAAAGGGCAC CATCGATGCG GCCGAATGGA TCGGCCCCTA TGACGACCTC
AAGCTGGGCT TCAACAAGGT CGCTCCGTTC TACTACTACC CCGGCTGGTG GGAAGGCAGC
CTGAACCTCG AGTTCTACGT GAACCAGAAG GCGCTGGCCG CGCTGACGCC CGAGCAGCGC
GCCATGGTGC AGGCCGCATC GCACGAGGCC CACGTGGTCA CCCAGGCCCG CTACGACGCG
CGCAATCCCG GCGCGCTCAA GCAACTGGTG GCCAGCAAGG CCAAGGTGCT GGCCTTCCCG
CAGACCGTGC TCGATGCCTC CTACAAGACC ACCATGGCGG TCTATGCGGA GCTGGCCGAG
AAAAATCCTG CGTGGAAGAA GATCTACGGC GACTACCGCA ACTTCCAGCG CGACGAGGTG
CTGTGGTTCC GCTTTGCCGA GGCGCGCTAC GACGCCTTCA TGTCGGCGCA AAAGCTGTGA
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| Protein sequence | MDRRKALKHA GLAGVLTAAA APAVHAQAAI RWRLASSFPR SLDTIYGSAE VFSKAIKEMS
GGKFEISVHA AGELMPAFGV VDGVQNGTVE IAHTAPYYFF GKNEAFAIGG AIPFGMNSRQ
LTAWIVDGNG GKLMREFYAE YGIVNFLGGN TGAQMGGWFR KEVKTPEDIK GLKFRIGGFA
GRIIERMGGV PQNIPGGEIY QALEKGTIDA AEWIGPYDDL KLGFNKVAPF YYYPGWWEGS
LNLEFYVNQK ALAALTPEQR AMVQAASHEA HVVTQARYDA RNPGALKQLV ASKAKVLAFP
QTVLDASYKT TMAVYAELAE KNPAWKKIYG DYRNFQRDEV LWFRFAEARY DAFMSAQKL
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