| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2243 |
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| Symbol | |
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| ID | 5747806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2462057 |
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| End bp | 2463139 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641297327 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001563268 |
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| Protein GI | 160897686 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.273001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0162344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGTC GTTCGATCAT CAAACATGCG GGAATCGCTG GCGTGCTGGC TGTGGGAGCC
GCACCCGCAG TCCATGCCCA GGAGGCGATC CGCTGGCGTC TGGCCGCGAG CTTTCCCAAG
TCGCTGGACA CCATCTTCGG CTCGGCCGAA ATGTTCTCCA AGACGCTCAA GGCGATGTCG
GGCGGCAAGT TCGAAGTCTC GGTGCATGCG GCCGGTGAGC TGATGCCCGC CTTCGGCGTG
GTCGATGGCA TCCAGAACGG CACCATCGAG ATGGCGCTGA CGGCGCCCTA TTACTTCACC
GGCAAGGACT ACATCTTCGC CTTCGGCTGC GCCGTGCCCT TCGGCCTGAC CGCCCGCCAG
ATGGATGCCT GGATGGAGCA CGGCGGCGGC CGCAAGCTCA TGGACGAGTT CTATGCCCAG
TACAACATCA AGAGCCAGAG CGCAGGCAAC ACGGGCACCC AGATGGGCGG CTGGTTCCGC
AAGGAAATCA AGTCGGTGGC CGATCTCAAG GGCCTGAAGA TGCGCCTGGG CGGCGGCCTG
TTCGGCGACG CCATGCTCAA GCTCGGCGTG GTCGCGCAGA ACATGCCCGT GGGCGAGGTC
TACCAGGCGC TCGAAAAGGG CACGCTGGAT GCCGTGGAAT TCGTGGGCCC CTACGACGAC
CAGAAGCTGG GCTTCAACAA GGTCGCTCCC TACTACTACT ACCCCGGCTG GTGGGAAGGC
GGCGCCGAGC TGGAGTTCTT CATCAACACC AAGGCGTATG CAGCCCTGTC GCCCGAGTAC
AAGGCCATGG TCGATGCAGC CTGCAACGTG GCGGCACGCG ACATGACGGC CAAGTACGAC
GCCAACAACC CCGTGGCGCT CAAGAAGCTG GTGGCCGACA AGACCCAGCT CAAGGCCTTC
CCCAAGGACT TCATGGATGC CGGCTACAAG GCCGTCATGG AGATCATGGC CGAGCATGAC
GCCAAGTCGC CCATGTTCAA GAAGATCAAC CAGAGCCTGC GCACCTTCCA GCGCGACCAG
CTGCTGTGGG AGCGCTTCTC GGAGTTCCGC TACAACAGCT ACATGACCAC GGCCAAGCTG
TAA
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| Protein sequence | MDRRSIIKHA GIAGVLAVGA APAVHAQEAI RWRLAASFPK SLDTIFGSAE MFSKTLKAMS
GGKFEVSVHA AGELMPAFGV VDGIQNGTIE MALTAPYYFT GKDYIFAFGC AVPFGLTARQ
MDAWMEHGGG RKLMDEFYAQ YNIKSQSAGN TGTQMGGWFR KEIKSVADLK GLKMRLGGGL
FGDAMLKLGV VAQNMPVGEV YQALEKGTLD AVEFVGPYDD QKLGFNKVAP YYYYPGWWEG
GAELEFFINT KAYAALSPEY KAMVDAACNV AARDMTAKYD ANNPVALKKL VADKTQLKAF
PKDFMDAGYK AVMEIMAEHD AKSPMFKKIN QSLRTFQRDQ LLWERFSEFR YNSYMTTAKL
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