Gene Daci_2227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2227 
Symbol 
ID5747790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2442674 
End bp2443246 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content65% 
IMG OID641297311 
ProductYceI family protein 
Protein accessionYP_001563252 
Protein GI160897670 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000482548 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00464038 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCTTTT CCTCCACGCT GACCTCCATC GCCCTGGCCG CTGCGGCCCT GGCTTCCCAA 
GCGGCACTGG CCGAGCAAAA GCTCGTGCCC GCCCAGAGCG CCGTGAACTT CACGGCCAAG
CAGATGGGCG TGCCCCTGCA GGGCCACTTC AAGAAGTTCG ATGCCCAGGT CCAGTTCGAC
ACGGCCAAGC CCGACACCAG CAAGATCCGC TTCACCGTGG ACACCGGCAG CGCCACCATG
GGCGCCAAGG AAACCGATGC CGAACTGCCC AAGGCGGACT GGTTCAACGT CGCCAAATTC
CCGCAGGCCG TGTTCGACTC CACCGCCGTC AAGGCACTGG GCGGCGGCAA GTACCAGGTG
GACGGCAAGC TCAGCATCAA GGGCCAGGTC CAGAACGTGA GCATTCCCGT GCAACTGGCC
CAGTCCGGCA CCACGACCAC GGCCACCGGC ACGCTGCCGC TCAAGCGCCT GCAATTCAAG
ATCGGCGAAG GCGAATGGGG CGATACCTCC ATGGTGGCCG ACGAGGTGCA GGTGCAGTTC
AAGCTGGCAC TGACCGGCGT GGGCAAGCTG TAA
 
Protein sequence
MRFSSTLTSI ALAAAALASQ AALAEQKLVP AQSAVNFTAK QMGVPLQGHF KKFDAQVQFD 
TAKPDTSKIR FTVDTGSATM GAKETDAELP KADWFNVAKF PQAVFDSTAV KALGGGKYQV
DGKLSIKGQV QNVSIPVQLA QSGTTTTATG TLPLKRLQFK IGEGEWGDTS MVADEVQVQF
KLALTGVGKL