| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2224 |
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| Symbol | |
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| ID | 5747787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2435961 |
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| End bp | 2437493 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641297308 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001563249 |
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| Protein GI | 160897667 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0182275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAGACC AGTTGAAATC CGCTTTCACC CGCCATGCCG GCGCAGCGCC CGGCGCCCGC
ACCCTGCACG AATGGCTGAA ATCACAGGTG GCCGACGGCA GCCTGGCCGT GGGCGCACGC
CTGCCCTCCA CCCGCGCCCT GGCGCTGGAC CTGGGTGTGT CGCGCACCAC CGTCACGGCC
GCCTACGAGC AGCTTGCGGC CGAAGGCTAT CTGGAGACCG CTCCAGGCAG CAGGGCGCGC
GTGGCGGCTG GCGCGGCGCA GCGCAGCCGT GCGCGCAGCA TGCCGGCAGC GGCCCAGCAG
CATGGCCGTC CCCGGCTGTC TTCCTATGGG CAGCGGGTGG ATGCGCTGGC GTCAGCCCTG
CCACCGGCAG CAGGCGATGG TGGGCCGGCC CCGATCGACT TTCTCTACGG CGCCCTGGCC
TTTGACGACT TTCCCACGCT GGCCTGGCGG CGCGCCTACA ACCGCGCCAT CGTGCAGCGC
CAGTCTTCCC TGTCCTACGA CGCGCCCGAA GGCGAGCCGG CGCTGCGCAT GGCGCTGCAA
GGCTATCTGC GCAGGGCGCG GGGGCTTGTC TGTTCGGCCG ATCAGATCGT GGTGGTGCAG
GGCTCGCAGC AGGCCATCGA CCTGTGCGCG CGCGTGCTGG TCGATCCGGG CGAGACCGTG
CTGATGGAAG AGCCCTGCTA CCTGATGGCG CGCCGCGTGT TCGAGGCCCA GGGCGCATGC
CTGCAGGAAA TGGCCGTCGA TGAACAGGGC CTGGATACCT CGGCGCTGGC CGGGCGCCAG
GCGCGGCTGG CCTATGTCAC GCCCTCGCAC CAGTTTCCGC TGGGCGGCGT GCTGCCCATA
GGCCGCAGGC AGCAGCTGCT GGCCTGGGCG CGCGCCACGG GTGCCTGGAT TCTGGAGGAC
GATTACGACG GCGAATTCCG CTACGGGCTG CGCCCCATCG ACGCCCTGCA GTCCATTGAC
GAGGTGGGTT GCGTCATCCA TGTCGGCACT TTCTCCAAGG CCTTGTCCCC GCAGATGCGC
ATGGGCTACC TGGTGCTGCC GCCGTCCCTG GTGCCCGTGT TCCGGGAAGC CCGGCGGCTG
GCCGACCGGC ATGCACCGCG CCTGGACCAG CTGGTGCTGG CCGCGCTGAT CGAGGACGGC
AGCTACGAGC GCCATGTGCG CGCCGCCCGC CGCCGCAACG AAGGCCGGCG TGCGGCATTG
CTGCAGGCGC TGGAGCGGCA CCTGCCGGGT GCGGTGCAGG TCGAAGGCTC GGCCTCCGGC
CTGCATGTGG TGGCCTGGGT GCCTGCCGTG CATCAGCGCG ATGAGATTGC CCTGGTGCGG
TTGGCGCGAG AGCGTGGCGT GGGCGTTCGC CCCATCTCGC CGCTCTATGC GGCCGGCGAT
GCCCATCGCC GCCAGTCCTG CGCCGGGCTG GTCCTGGGCT ATGCGAGCCT GCAGCCGCAG
GCCATCGAGC AAGGGGTGCG CAGGCTGGCG GGCGTGGTGC GGGATGGACA GAAAAAAGGC
GGGGCCTTCG AGGCCCCGCC TTGCCGACGC TGA
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| Protein sequence | MADQLKSAFT RHAGAAPGAR TLHEWLKSQV ADGSLAVGAR LPSTRALALD LGVSRTTVTA
AYEQLAAEGY LETAPGSRAR VAAGAAQRSR ARSMPAAAQQ HGRPRLSSYG QRVDALASAL
PPAAGDGGPA PIDFLYGALA FDDFPTLAWR RAYNRAIVQR QSSLSYDAPE GEPALRMALQ
GYLRRARGLV CSADQIVVVQ GSQQAIDLCA RVLVDPGETV LMEEPCYLMA RRVFEAQGAC
LQEMAVDEQG LDTSALAGRQ ARLAYVTPSH QFPLGGVLPI GRRQQLLAWA RATGAWILED
DYDGEFRYGL RPIDALQSID EVGCVIHVGT FSKALSPQMR MGYLVLPPSL VPVFREARRL
ADRHAPRLDQ LVLAALIEDG SYERHVRAAR RRNEGRRAAL LQALERHLPG AVQVEGSASG
LHVVAWVPAV HQRDEIALVR LARERGVGVR PISPLYAAGD AHRRQSCAGL VLGYASLQPQ
AIEQGVRRLA GVVRDGQKKG GAFEAPPCRR
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