| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2216 |
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| Symbol | |
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| ID | 5747779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2428928 |
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| End bp | 2431840 |
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| Gene Length | 2913 bp |
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| Protein Length | 970 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641297300 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001563241 |
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| Protein GI | 160897659 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0832976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CCATTGCCCA GCCAGGCCTC GACAGCCTGT CCAAATCGTT TGAACCCGCA
GCCATCGAGG CCCAATGGGG CCCTGAATGG GAAAAGCGCG GCTACGGCGC AGCCGGCGTG
CGCGGCACGG GCCAGGCAGA TGCATCCCAG CCATCGTTCT CCGTGCAGCT GCCGCCGCCC
AATGTGACGG GAACGCTGCA CATGGGCCAT GCGTTCAACC AGACCATCAT GGACAGCCTC
ACGCGCTACC ACCGCATGAA GGGCCACAAC ACGGTCTGGG TGCCCGGCAC CGACCACGCG
GGCATCGCCA CCCAGATCGT GGTGGAGCGC CAACTGCAGG AGCAGGGCAT CGCCAGCCGC
CACGACATGG GCGCGACGCC TCCCGAGGCG CGCAAGAACT TCGTGAGCAA GGTCTGGGAG
TGGAAGAACC AGAGCGGCAA CACCATCACC GGCCAGATGC GCCGCATGGG CGACAGCGTG
GACTGGAGCC GCGAGTACTT CACCATGGAC GACAAGCTGT CGTCCATCGT CAACGAGACC
TTCGTGCGCC TGTACCAGCA GGGCCTGATC TACCGTGGCA AGCGCCTGGT GAACTGGGAC
CCCAAGCTGA TGTCCGCCGT CTCCGACCTC GAGGTCGAGA ACGAGGAAAA GGACGGCTCG
CTGTGGCACA TCGCCTATCC GCTGGCCGAC GGCTCGGGCC AGCTCGTGGT GGCCACCACG
CGCCCGGAAA CCATGCTGGG CGACGCGGCC CTGATGGTGC ACCCCGAGGA CGAGCGCTAC
CAGGCGCTGA TCGGCAAGAC CGTGATCCTG CCCCTGGTGG GCCGCGAGAT CCCCATCATT
GCCGACGACT ACGTGGACCG CGAGTTCGGC ACGGGCGTGG TCAAGGTCAC GCCTGCGCAT
GACAACAACG ACTACGCCGT GGGCCAGCGC CACGGCCTGC CGATGATCTG CGTGCTGACG
CTGACGGCCA CCATCAACGA CGAGGCGCCC GAGAAGTACC GCGGCATGGA CCGCTTCGTG
GCGCGCAAGG CCATCGTGGC CGACCTGGAC GCGGCCGGCC TGCTGGTCGA GACCAAGAAG
CACAAGCTCA TGGTGCCCAT CTGCACGCGC ACGGGCCAGG TGATCGAGCC CATGCTGACC
GACCAGTGGT TCGTGGCCAT GAACAAGGTG GGCGAAGGCG ATGCCACGGG CAAGTCCATC
GCGCAGAAGG CCATCGATGC CGTCTCCAGC GGCCAGGTGC AGTTCGTGCC CGAGAACTGG
GTCAACACCT ACAACCAGTG GATGAACAAC ATCCAGGACT GGTGCATCTC GCGCCAGCTG
TGGTGGGGCC ACCAGATTCC CGCCTGGTAC GACGAGGACG GCAAGGTCTA CGTGGCCCGC
ACCGAGGAAG AAGCCCGCGC CCAGGCCCCC GGCAAGACGC TCACGCGCGA CGAGGACGTG
CTGGACACCT GGTACTCCTC GGCCCTGGTG CCGTTCTCCA CCATGGGCTG GCCGAACCAG
ACCGAGGCGG CCGACGATGA CTACAACCTC TACCTGCCCA GCTCGGTGCT GGTCACGGGC
TACGACATCA TCTTCTTCTG GGTCGCCCGG ATGATCATGA TGACCACGCA CTTCACGGGC
CGCGTGCCCT TCCGCCATGT CTACATGCAT GGCCTGGTGC GTGACGCCCA GGGCAAGAAG
ATGAGCAAGT CCGAGGGCAA CGTGCTCGAC CCCGTGGACC TGATCGACGG CATCGACCTG
GACACCCTGC TGGACAAGCG CACGCAGGGC CTGCGCCGCC CCGAGACCGC GCCCCAGGTG
CGCAAGAACA CGCAAAAGGA ATTCCCCGAG GGCATTCCCG CCTACGGCGC CGACGCGCTG
CGCTTCACCT TCGCGGCCCT GGCCTCGCTG GGCCGCTCCA TCAACTTCGA CAGCAAGCGC
TGCGAGGGCT ACCGCAACTT CTGCAACAAG CTGTGGAACG CCAGCCGCTT CGTGCTGATG
AACTGCGAAG GCCATGACTG CGGCCTGCTG CCCCACACCA AGGAGCAATG CCAGGCCGGC
GGCGAGTTCG CGGGCTACAT GCAGTTCAGC CAGCCCGACC GCTGGATCGC CTCGCAGCTG
CAGAAGGTCG AGGCCGAAGT GGCCAAGGGC TTTGCCGAAT TCCGTCTGGA CAACGTGGCC
AACGCGCTGT ACGACTTCGT CTGGAACGAG TTCTGCGACT GGTACCTGGA AATCGCCAAG
GTGCAGATCC AGACCGGCAA CGAGGCCCAG CAGCGCGCCA CGCGCCGCAC GCTGATCCGC
ACGCTGGAAG CCATCCTGCG CCTGGCCCAC CCCATCATCC CGTTCGTGAC CGAAGCCCTG
TGGCAGAAGG TCGCCCCGGT CGCCGGCCTG CCCGGCGAGT CCGTGGCCGT GGCCCGCTAC
CCCGAGGCCC AGCCCGAGAA GATCGACGAG GCCGCCATCG CCTACGTGGG CCGCATCAAG
CAGATGATCG ACGCCTGCCG CACGCTGCGC GGCGAGATGG GCGTGTCGCC GGCCCAGCGC
CTGCCGCTGC TGGCCGTGGC CAGCTCGGCC GACGAGGCAC AGTTCCTGCG CACCAATGCC
GCCGTGCTGC AAAACCTGGC CAAGCTCAGC GAGGTCAAGG TGTTCGACGA CGAAGCCGCC
TGGGCCGAGG CCGCCCAGGC CGCCCCGGTC TGCGTGGTGG GCGAGGCGCG CCTGGCGCTG
TTCGTGGAGA TCGACGTGGC CGCCGAAAAG GCCCGCCTGT CCAAGGAAGC CGCACGCCTG
GAAGGCGAGA TCACCAAGGC CAATGCCAAG CTGGGCAACG AGGCCTTCGT GGCCAAGGCG
CCCCCGGCCG TCATCGACCA GGAAAAGAAG CGCGTGGCCG ACTTCGGCGC CACACTGATC
CGCATCCAGG AACAACTCGC CCGCCTGGGT TGA
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| Protein sequence | MSDTIAQPGL DSLSKSFEPA AIEAQWGPEW EKRGYGAAGV RGTGQADASQ PSFSVQLPPP
NVTGTLHMGH AFNQTIMDSL TRYHRMKGHN TVWVPGTDHA GIATQIVVER QLQEQGIASR
HDMGATPPEA RKNFVSKVWE WKNQSGNTIT GQMRRMGDSV DWSREYFTMD DKLSSIVNET
FVRLYQQGLI YRGKRLVNWD PKLMSAVSDL EVENEEKDGS LWHIAYPLAD GSGQLVVATT
RPETMLGDAA LMVHPEDERY QALIGKTVIL PLVGREIPII ADDYVDREFG TGVVKVTPAH
DNNDYAVGQR HGLPMICVLT LTATINDEAP EKYRGMDRFV ARKAIVADLD AAGLLVETKK
HKLMVPICTR TGQVIEPMLT DQWFVAMNKV GEGDATGKSI AQKAIDAVSS GQVQFVPENW
VNTYNQWMNN IQDWCISRQL WWGHQIPAWY DEDGKVYVAR TEEEARAQAP GKTLTRDEDV
LDTWYSSALV PFSTMGWPNQ TEAADDDYNL YLPSSVLVTG YDIIFFWVAR MIMMTTHFTG
RVPFRHVYMH GLVRDAQGKK MSKSEGNVLD PVDLIDGIDL DTLLDKRTQG LRRPETAPQV
RKNTQKEFPE GIPAYGADAL RFTFAALASL GRSINFDSKR CEGYRNFCNK LWNASRFVLM
NCEGHDCGLL PHTKEQCQAG GEFAGYMQFS QPDRWIASQL QKVEAEVAKG FAEFRLDNVA
NALYDFVWNE FCDWYLEIAK VQIQTGNEAQ QRATRRTLIR TLEAILRLAH PIIPFVTEAL
WQKVAPVAGL PGESVAVARY PEAQPEKIDE AAIAYVGRIK QMIDACRTLR GEMGVSPAQR
LPLLAVASSA DEAQFLRTNA AVLQNLAKLS EVKVFDDEAA WAEAAQAAPV CVVGEARLAL
FVEIDVAAEK ARLSKEAARL EGEITKANAK LGNEAFVAKA PPAVIDQEKK RVADFGATLI
RIQEQLARLG
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