Gene Daci_2203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2203 
Symbol 
ID5747765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2416963 
End bp2417424 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content71% 
IMG OID641297286 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_001563228 
Protein GI160897646 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.282185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.128098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAC AAGAACACAT CCGCCTGCTG CGCCATGCCG TGCAGTTGGC GCACGACAAC 
CGCCTGCGGG GCGGCCGGCC CTTCGGCGCC CTGCTCGCGC GCGAGGGGCA GATCCTGTCC
ACCGGCGTCA ACGAGATCGT GCAAAGCCAT GACCCCAGCG CCCATGCCGA AATGCAGGCG
CTGCGCGCAG GCACGCGCGC CCAGGCCAAC CCCAGCCTGG CTGGCTGCAC CATCTACGCC
AGCGGCCACC CTTGCCCCAT GTGCCTGGCG GCGCTGGTGA TGGCCGGGGC CGAGCAGGTT
TTCTTCGCCT TCGACAACGC GGACGCCCAG CCTTACGGCC TGTCCAGCGA AGGCGCCTAC
CAGCGGCTGC GCATGCCGCT GCAGCCGCCA CCGCTGCCCC TGACGCGGCT GGACACGGGC
ATCACGGCGG CCCAGCTGTA TGGCAACGCC CCCTGGGCCT GA
 
Protein sequence
MQEQEHIRLL RHAVQLAHDN RLRGGRPFGA LLAREGQILS TGVNEIVQSH DPSAHAEMQA 
LRAGTRAQAN PSLAGCTIYA SGHPCPMCLA ALVMAGAEQV FFAFDNADAQ PYGLSSEGAY
QRLRMPLQPP PLPLTRLDTG ITAAQLYGNA PWA