Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2197 |
Symbol | |
ID | 5747759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2411012 |
End bp | 2412142 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641297280 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001563222 |
Protein GI | 160897640 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.974618 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGT CCCGGAAGTT GTGTATTGCG GCCGTCGTGG CCGGCATGGG TGGCGTGGCC ATGGCCCAGG AGCAGGTGAT CCGCATCGGC CACATCGGCC CGGTGTCCGG ACCCCAGGCC AATTTCGGCA AGGACAACGA AAACGGCGTA CGCATGGCCA TCGACGAGCT CAATGCCAAG GGCATGGAGA TCGCCGGCAA GAAGGTCAAG TTCCAGCTGG TGGCCGAAGA CGATGTGGCC GATCCCAAGC AGGGCACGGC CGCCGCGCAG AAGCTGTGCG ACGACAAGGT CGCCGGCGCC GTGGCCTTCC TCAACTCGGG CGTGGCCATT CCCTCGTCCA AGGTCTTCCA GGACTGCGGC ATTCCCATGA TCACGGGCGC GGCCACCAAC CCCGACCTGA CCAAGCCCGG CTGGAACACC ACCTACCGCG TGATCGCCAA CGACAACGCC CTGGGCGCGG CGCTGGCCAA GTACGCGGCC GAAACGCTCA AGCTCAAGAC CGTGGCCATC ATCGATGACC GCACGGCCTA CGGCCAGGGC CTGGCCAATG TGTTCAAGAA GGATGCGGAA AAGCTGGGCG TGAAGGTCGT GGCCTCGGAG TTCACGAACG ACAAGGCCAC GGACTTCATG GCCATCCTGA CCTCCATCAA GGCCAAGAAG CCCGAGGGCA TCTTCTACGG CGGCATGTAC GGCCAGGCCG GCCCCATGCT GCGCCAGATG GCCCAGCTGG GCCTGAACGA TGCCAAGTAC TTCGGCGGCG ATGGCCTGTG CGTGCCCGAG CTGGCCAAGG TGGCGGCCGG TGCCAAGCCG CTGGACAACG TGATCTGCGC CGATGGCGGC GCCTCGCTGG CCAAGATGCC CGGCGGCACG GAATGGAAAA AGCGCTACGA CGCCAAGTAC CCCGGCCAGT TCCAGGTCTA CAGCCCGTAC TTCTACGACG CCACCATGAT GCTGGCCGAC GCCATGAAGC GCGCCAACTC CTGGGACCCC AAGGTCTACA TTCCCTTCCT GCAAAAGGCC GACTACTCGG GCGTGACCTC GAAGATCGCC TTCGAGAAGA ACGGCGAGAT GAAGAACCCC TCGTACACGC TGAGCGTGTT CAAGAACGGC CAGAAGACAG CCCTCGACTG A
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Protein sequence | MKMSRKLCIA AVVAGMGGVA MAQEQVIRIG HIGPVSGPQA NFGKDNENGV RMAIDELNAK GMEIAGKKVK FQLVAEDDVA DPKQGTAAAQ KLCDDKVAGA VAFLNSGVAI PSSKVFQDCG IPMITGAATN PDLTKPGWNT TYRVIANDNA LGAALAKYAA ETLKLKTVAI IDDRTAYGQG LANVFKKDAE KLGVKVVASE FTNDKATDFM AILTSIKAKK PEGIFYGGMY GQAGPMLRQM AQLGLNDAKY FGGDGLCVPE LAKVAAGAKP LDNVICADGG ASLAKMPGGT EWKKRYDAKY PGQFQVYSPY FYDATMMLAD AMKRANSWDP KVYIPFLQKA DYSGVTSKIA FEKNGEMKNP SYTLSVFKNG QKTALD
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