Gene Daci_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2173 
Symbol 
ID5747735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2387617 
End bp2388087 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content65% 
IMG OID641297256 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001563198 
Protein GI160897616 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.815708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.596394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATCG AGATCGACAG AACGGACCGG CTGCTGATCC GCGCCTTGCA GGACAACGCG 
CGGCTGACCT CGGGCGAATT GGCGCAACGC GTGCACTTGT CGCAATCGCC GTCGTGGCGG
CGCATCAAGC GGCTGGAGGA TGAGGGCGTG ATCACCGGCT ACCACGCCGC GCTGAGCCGG
CGCGCCATCG GCTTTGGCGT GCTGGCCTTC GTGATGGTGG GCATAGACCA TCAGAACGAG
GAGTCATCGC GCCACTTCCA GGAAGCGGTC TGCGCCATCC CCGAGGTCGT GATGTTCCAC
GGCATCTCGG GGCCGGAGGA CTTCCTGCTG GTCGTCGTGG CGCGCGATCT CGATGCCTAT
TCGGACCTGC TGCTCACCCG CCTGCACCGG CTGCCCGGCG TGCGTCAGGT GCACACGCAT
TTCTCGCTGC AGGAGTTCAA GGGGCAACTG GCGGGGCTGC CCGTGGAATA A
 
Protein sequence
MSIEIDRTDR LLIRALQDNA RLTSGELAQR VHLSQSPSWR RIKRLEDEGV ITGYHAALSR 
RAIGFGVLAF VMVGIDHQNE ESSRHFQEAV CAIPEVVMFH GISGPEDFLL VVVARDLDAY
SDLLLTRLHR LPGVRQVHTH FSLQEFKGQL AGLPVE