Gene Daci_2123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2123 
Symbol 
ID5747685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2330593 
End bp2331177 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content67% 
IMG OID641297206 
Productputative lipoprotein 
Protein accessionYP_001563148 
Protein GI160897566 
COG category[S] Function unknown 
COG ID[COG2930] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0746601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCAGT TTTCTTTGCG TACCGTCGTG ATGGCCACTG CACTGGCGGC CGGCAGCATT 
GCCATGGTCG GCTGCACCAC CACCAAGCCG GAAACCCAGT CCGCGCCGCG CGCTGATGCC
ACCACCGTCA ATGCGCGCGC CAACGCCGCT CTGGAGCGGC TGTACCAGAC GGCGCCAGGC
TCCAAGGAAA TGGTGGCCCG CTCCAAGGGC GTGCTGATCT TCCCCTCGGT GATCGGCGGC
AGCTTCGTCA TCGGTGTCGA GCATGGCCGC GGCGTGCTGC GCGTCGGCGG CCAGAACAAG
GGCTACTACA GCACGACCGG CGCCTCGGTG GGCTGGCAGG CCGGTGGCCA GTCCAAGGCT
GTGATCTATG TGTTCAACAC CCAGGAAGCG CTGGACAAGT TCCTGGCCAG CGATGGCTGG
TCCGTGGGCG CCGATGCCAC GGTGGCCGCA GGCAAGGTGG GCGCCAATGG CAGCGTGGAC
ACCACGACCG CCCAGGGCCC CGTGACCAGC TATGTGCTGA CCAATGCGGG CCTGGAAGCC
GGCGTGTCGC TGCAGGGCTC GAAGATCACC AAGGTGGTCG AGTGA
 
Protein sequence
MRQFSLRTVV MATALAAGSI AMVGCTTTKP ETQSAPRADA TTVNARANAA LERLYQTAPG 
SKEMVARSKG VLIFPSVIGG SFVIGVEHGR GVLRVGGQNK GYYSTTGASV GWQAGGQSKA
VIYVFNTQEA LDKFLASDGW SVGADATVAA GKVGANGSVD TTTAQGPVTS YVLTNAGLEA
GVSLQGSKIT KVVE