| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2113 |
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| Symbol | |
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| ID | 5747675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2318812 |
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| End bp | 2319918 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641297196 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_001563138 |
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| Protein GI | 160897556 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00371607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACAAAGA CATACCGCAT CGCCTGCATT CCCGGCGATG GCATCGGCAA GGAAGTGGTG
CCCGCAGGGC AGGAGGTGCT GCAGGCGCTG GCCGAAACCC AGCCCGGCCT GGGCTTTGCC
TTCACCAGTT TCGGCTGGGG CGGCGACTGG TACCGCGCGC ACGGCGAGAT GATGCCGGCC
GACGGGCTGG ACGCGCTGCG CGGCCAGGAC GCCATCCTGT TCGGCTCGGC CGGCGACCCG
CACATTCCCG ACCATGTCAC GCTGTGGGGC CTGCGCCTGA AGATCTGCCA GGGGTTCGAT
CAGTACGCCA ATGTGCGGCC AACGCGCATC CTGCCCGGCA TCGATGCGCC GCTCAAGCGC
TGCGCGCGAG AGGATCTGGA CTGGGTCATC GTGCGCGAGA ACTCCGAAGG CGAATACGCG
GGCGTGGGCG GCCGCGCTCA CCAGGGCCAT CCCATCGAGG TGGCCACCGA CGTGAGCATG
ATGACCCGTG CGGGCGTGGA GCGCATCATG CGCTTTGCCT TCCGCCTGGC GCAGTCGCGG
CCGCGCAAGC TGCTGACGGT GATCACCAAG TCCAACGCCC AGCGCCACGC CATGGTGATG
TGGGACGAGA TTGCGGTGCA GGTGGCCGCC GAGTTCCCCG ACGTGCGCTG GGACAAGGAG
CTGGTGGACG CGGCCACGGC GCGCATGGTC AACCGCCCCG CCTCGCTGGA CACCCTGGTC
GCCACCAACC TGCATGCCGA CATCCTCAGC GACCTGGCGG CCGCGCTGGC CGGCAGCCTG
GGCATTGCGC CCACGGGCAA CATCGATCCG GAGCGCCGCT ACCCCAGCAT GTTCGAGCCC
ATCCACGGAT CGGCCTTCGA CATCATGGGC CAGGGCCTGG CCAACCCCGT GGGCACGTTC
TGGAGCTGCG TGATGCTGCT GGAGCACCTG GGCGAGCACC GCGCCGCGCA GCGGCTGATG
CAGGCCGTGG AGCAGGTGAC GGCCGATGCC TCGCTGCACA CGCGCGACCT GGGCGGCAAG
GCCACCACGC GCCAGGTCAC CGACGCGGTC TGCGCACGGC TGCGCGCGCA GTCCGCCGAG
GTCCAGGCCG TGCCCGTGCC TGCCTGA
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| Protein sequence | MTKTYRIACI PGDGIGKEVV PAGQEVLQAL AETQPGLGFA FTSFGWGGDW YRAHGEMMPA
DGLDALRGQD AILFGSAGDP HIPDHVTLWG LRLKICQGFD QYANVRPTRI LPGIDAPLKR
CAREDLDWVI VRENSEGEYA GVGGRAHQGH PIEVATDVSM MTRAGVERIM RFAFRLAQSR
PRKLLTVITK SNAQRHAMVM WDEIAVQVAA EFPDVRWDKE LVDAATARMV NRPASLDTLV
ATNLHADILS DLAAALAGSL GIAPTGNIDP ERRYPSMFEP IHGSAFDIMG QGLANPVGTF
WSCVMLLEHL GEHRAAQRLM QAVEQVTADA SLHTRDLGGK ATTRQVTDAV CARLRAQSAE
VQAVPVPA
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