| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2036 |
|---|
| Symbol | |
|---|
| ID | 5747597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 2227992 |
|---|
| End bp | 2229308 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641297118 |
|---|
| Product | fumarylacetoacetase |
|---|
| Protein accession | YP_001563061 |
|---|
| Protein GI | 160897479 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.94384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.503936 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTGA ACGAAACCCA TGACGCAGGC TTGCGCAGCT GGGTGGCCTC GGCCAACACC
GGCGCCAGCG ACTTTCCCAT CCAGAACCTG CCGTTTGCGG TGTTCCGCCG CGCAGGCAGC
CAGGAGGCCT GGCGCGGCGG CGTGGCCATT GGCGACCAGG TGCTGGACCT GGCGCGCGCA
AGCGCGATCA AGGCGCTGGG CGATGCCGTG CAGCCGCAGC TGGAAGCCGC TTCACAACAG
CACCTGAACG GCTTCATGGC CATGGGACCT GCCGCCTGGT CGGCCCTGCG CCTGGCGCTG
TCGCGCGCGC TGCGCGAAGG CGCTGCCGCA CAGGCGGCCC TGCAGGATTG CCTGGTGGCC
CAGTCCGACG TGGAGTACAC GGTGCCGGCC CAGGTGGGCG ACTACACGGA CTTCTATACC
TCGGTGCACC ACGCCACCAA CGTCGGCCAG CTGTTCCGCC CGGACAACCC GCTGATGGAG
AACTACAAGT GGGTGCCGAT TGGCTACCAC GGCCGTGCGT CCAGCCTGCG TGTGTCGGGC
GTGGACTTCC GCCGCCCCAT GGGCCAGCTG AAGGCGCCCG ACGCCACCGC ACCCGCGCTC
AAGCCCTGCG CACGCCTGGA CTATGAGCTG GAGATGGGCA TCTACACCGG CGCCGGCAAC
GCCTGGGGCG AGGCGATTTC CATGGACGAG GCAGAGAACC ACATCTTCGG CCTGTGCCTG
CTCAACGACT GGTCGGCGCG CGACATCCAG GCCTGGGAAT ACCAGCCGCT GGGCCCCTTC
CTGTCGAAGA ACTTCGCCAC CACGGTCTCG CCCTGGATCG TGACGCTGGA GGCGCTGGAG
CCCTACCGCA CGGCCTTCAC GCGGCCCGCC ACAGATCCCC AGCCCCTGCC CTACCTGAGC
TCGGCCGCCA ACTCCGAGCG CGGCGCGTTC GACGTGCAGT TGAGCGTGGC GCTGGAGACC
GGCCGCATGC GCGCCGAAGG CCAAGCCGCC CAGCAAATCA CCCACACCAG CTACCGCCAC
GCCTACTGGA CCATGGCACA GCTGGTGGCC CACCACAGCG TCAACGGCTG CGACCTGCAG
CCCGGTGACC TGCTGGGCAC GGGCACGCTG TCCGGCCCCA CCTCCAGCGA GGCCGGTGCG
CTGCTGGAGC TGACCGAAGG CGGCAAGAAG CCCGTGGCGC TGGCCAATGG CGAGAGCCGC
ACCTTCCTGC AGGATGGCGA TGCCGTGATC CTGCGCGGCT GGTGCGAGAA GCCGGGCGCC
GCGCGCATCG GCTTCGGCGA GTGCCGCGCC ACCGTGCTGC CCGCGCGCCA GGCCTGA
|
|---|
| Protein sequence | MSLNETHDAG LRSWVASANT GASDFPIQNL PFAVFRRAGS QEAWRGGVAI GDQVLDLARA
SAIKALGDAV QPQLEAASQQ HLNGFMAMGP AAWSALRLAL SRALREGAAA QAALQDCLVA
QSDVEYTVPA QVGDYTDFYT SVHHATNVGQ LFRPDNPLME NYKWVPIGYH GRASSLRVSG
VDFRRPMGQL KAPDATAPAL KPCARLDYEL EMGIYTGAGN AWGEAISMDE AENHIFGLCL
LNDWSARDIQ AWEYQPLGPF LSKNFATTVS PWIVTLEALE PYRTAFTRPA TDPQPLPYLS
SAANSERGAF DVQLSVALET GRMRAEGQAA QQITHTSYRH AYWTMAQLVA HHSVNGCDLQ
PGDLLGTGTL SGPTSSEAGA LLELTEGGKK PVALANGESR TFLQDGDAVI LRGWCEKPGA
ARIGFGECRA TVLPARQA
|
|---|
| |