| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2024 |
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| Symbol | |
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| ID | 5747585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2215181 |
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| End bp | 2216554 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641297106 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001563049 |
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| Protein GI | 160897467 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.796607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCACG CACACGCCAC CGCCCAAGCC GCCGCCCAAG CCACAGCCCA GGTCTTTCCC
ACCGCCCGCC ATCCCGCCGC GCTCAACCGT GCCGCCCTGG CCACCGCCCT GGCCGCCGTG
CTGCTGGCCG GCTGCGCGTC CCGGCCGGCG CCTGCGCCGG TCACGGTGCC GCCCTCCATG
CCCGCCCCCA CGGCGCCTGT CGCACCCGTG CAGCCCGAAC CAGCCACCGC GCCGGATGCC
GCCCAGCAGG CCGAGGCCAC CAGCTTCGAA GCATGGAAGC GGGATTTCGC GCGCAAGGCG
CTGGACGCCG GCATCTCGGA GAAAACCGTG CGCAGCGCGC TGGAGCCTGC CCGGCTGCAA
CGCCGCGCGG TGCAGCTGGA CCGCTCGCAG CCCGAATTCA CGCGCACGCC CTGGCAGTAC
CTGGACAGCG CCGTATCGGC CCAGCGCATT GCCCAGGGCC GCGCCAAGCT GCGCGAAGCG
GCTGCACCGC TGCAGTCGGC CAGCCAGCGC TATGGCGTGC CGGCCGAGGT GATCGCCGCC
ATCTGGGGCA TGGAAAGCAA TTTCGGCGGC AACTTCGGCA ACTTCCCCAC GGTCGATGCG
CTGGCCACGC TGGCCTTCGA CGGCCGGCGC GCCGCCTGGG CGCAAAAGGA GCTGCTTGCA
GCCCTGCGCA TCATCGACAA CGGCGATATC GATGCGGCCC ACATGATCGG CTCCTGGGCG
GGTGCCATGG GCCATACGCA ATTCCTGCCC TCCGTGTTCC TGGCCTATGC GGTGGATGCC
GATGGCGACG GCCGCCGGGA CATCTGGGGC AGCCTGCCCG ATGTGACTGC CTCCACGGCG
AACTACCTGG CCCATTCGGG CTGGAAGACG GGCGAGCCCT GGGGCGTGGA AGTGCGCCTG
CCGGCAGGCT TTGACCATGC ACGCGCCGAG ACCAGCGTGC GCCAGGACAG CGCGCAATGG
GCGGCCGAAG GCGTGCAGGC CGTGGACGGC TCCGCCCTGC CCTCCATGGC CGATGCCAGC
GTGATCGCGC CGGCCGGCGC GCGCGGGCCG GCCTTCATGG TGGGAGCCAA CTTCCGCACC
ATCCTGCGCT ACAACAACTC CGTGAATTAC GCGCTGGGCG TGGGCCTGCT GTCGCAGCAA
CTGGCCGGCG GCCCGGGCGT GCAGGCGGCC TGGCCGCGCG ATCTGGCACC GCTGTCGCGC
GACCAGTTGC GCGCCTTGCA GGCCGCGCTC AACGAACGGG GATTTTCGGC CGGCACCGCC
GATGGCGTGA TGGGCCCGGC CACGCGCGCG GGCCTGCGCC AGTTCCAGCA AAGCCAGGGC
CTGGTGGCCG ACGGCTATCC CACGCTGGAG CTGCTGCAGA AACTGCAGCC CTGA
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| Protein sequence | MPHAHATAQA AAQATAQVFP TARHPAALNR AALATALAAV LLAGCASRPA PAPVTVPPSM
PAPTAPVAPV QPEPATAPDA AQQAEATSFE AWKRDFARKA LDAGISEKTV RSALEPARLQ
RRAVQLDRSQ PEFTRTPWQY LDSAVSAQRI AQGRAKLREA AAPLQSASQR YGVPAEVIAA
IWGMESNFGG NFGNFPTVDA LATLAFDGRR AAWAQKELLA ALRIIDNGDI DAAHMIGSWA
GAMGHTQFLP SVFLAYAVDA DGDGRRDIWG SLPDVTASTA NYLAHSGWKT GEPWGVEVRL
PAGFDHARAE TSVRQDSAQW AAEGVQAVDG SALPSMADAS VIAPAGARGP AFMVGANFRT
ILRYNNSVNY ALGVGLLSQQ LAGGPGVQAA WPRDLAPLSR DQLRALQAAL NERGFSAGTA
DGVMGPATRA GLRQFQQSQG LVADGYPTLE LLQKLQP
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