Gene Daci_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2010 
Symbol 
ID5747569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2196589 
End bp2197671 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content70% 
IMG OID641297090 
ProductAraC family transcriptional regulator 
Protein accessionYP_001563035 
Protein GI160897453 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCC CTGCGCTCCA TGCCATCGGT ACCGTGGCCG CAGGCCGCAG GCCCGTCACC 
TGCGGCCTTA TCCGCAGTGC CAGCCTGCAT GGCTATGCCG ACCTGGTGAA AAGCCTGGGC
CATGATCCCG CCGTCCTTGT GCGCGCGGCG GGATTGTCGG CGCGCCTGCT CGACGACCCG
GAGACGCTGA TTCCCATCCA TGCCGTGCGC GAGCTGCTGG AGGTGGCCGC GCGCACCACG
GGAACGCAGG ATTTCGCGCT GCGCCTGGCG GCGCGGCGCA GCCTGTCCCA CCTGGGCCCC
ATCAGCCTTG TGCTGCAGCA AGAGCCCACG CCGCGCCAGG CGCTGGACAC GCTGTGCCGC
TACCTCAAGC TGCTGAGTGC GGGCATGTTC GTACGCATCG AGGACGCGGG CTCCGGGGTG
CTGGTGCGCC AGGACCTGGT GCCCATCGCG GGCATGGCCA TGCGCCAGTC CATGGAGCTG
GCGGTGGGCG TGATGTTTCG CGTGCTGCGC GAGCTGATCG GCGCCCAGTG GCGCCCGCAG
CAGGTCAGCT TCGTACACCG CGCACCGGCC GATGCATCGG CCCACCGTGC CTTCTTCGGC
GTGACCCCTT TGTTTGACCA GCCTTTCAAC GGCATGGTCT GCCGCCTGGC GGATCTGCAA
CTGCTGCGCG AATGCGGCCA GGCGCAGGGC TCGGGCGTTG CGCGCTTTGC GCGAAGCCAT
CTGGAGCAGG CGCTGCGCAG CCGGGGCGAA GGCATGCAGG CGGCCTGCAG GGAGCTGATC
ATTGCACTGC TGCCGGGCGG CCGCTGTACG GCCCAGCAGG TGGCACGCCA GTTGGGAATG
GACCGCCGCA CGCTGCACCG CCGCCTGCTT GCGGAGGGGC AGACTTTCTC GGCGCTGCTC
GACACCATCC GCAGGGAACT GGTGCTGCGC CATCTGCAAG ACGGTGGCCA GCCCCTGGGC
GAGGTGGCGG GCCTGCTGGG GTTTGCCGCG CCCAGCGGCT TTTGCCACTG GTTCCGGGCC
GCTTTCGGCG CCAGCGTCTC GGACTGGCGC AGGCGCGGGC AGGGACGGGT TGGCGAGGCC
TAG
 
Protein sequence
MQTPALHAIG TVAAGRRPVT CGLIRSASLH GYADLVKSLG HDPAVLVRAA GLSARLLDDP 
ETLIPIHAVR ELLEVAARTT GTQDFALRLA ARRSLSHLGP ISLVLQQEPT PRQALDTLCR
YLKLLSAGMF VRIEDAGSGV LVRQDLVPIA GMAMRQSMEL AVGVMFRVLR ELIGAQWRPQ
QVSFVHRAPA DASAHRAFFG VTPLFDQPFN GMVCRLADLQ LLRECGQAQG SGVARFARSH
LEQALRSRGE GMQAACRELI IALLPGGRCT AQQVARQLGM DRRTLHRRLL AEGQTFSALL
DTIRRELVLR HLQDGGQPLG EVAGLLGFAA PSGFCHWFRA AFGASVSDWR RRGQGRVGEA