Gene Daci_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2009 
Symbol 
ID5747568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2195605 
End bp2196576 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content70% 
IMG OID641297089 
Productalcohol dehydrogenase 
Protein accessionYP_001563034 
Protein GI160897452 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.792874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGG CCATACGCTT TCATACCACC GGCGGCCCCG AGGTGCTCAG GCTGGAGCAT 
GCCGAGGCCG GCGCGCCGGG ACCCGGCCAG GCGCGCGTGC GCCACAGCTT CATCGCCGTC
AACTTCATCG ACATCTATTT CCGCACGGGC CGCTATCCGC TGGCCCTGCC CAACGGCCTG
GGCTCGGACG CCGTGGGCGT TGTCGAGGCC GTGGGGGAGG GCGTGACCGA AGTGCGGCCC
GGCGACCGCG TGGGCTACCT CATGGGCCCG CAGGGCGCCT ACAGCGATGT GCGCGTGATG
CCGGCCGAGG TGCTGATCCC GCTGCCCGAC GGCATCAGCG ACCGCACGGC GGCCACGCTG
ATGATGAAGG GCATGACGGC GCAGTACCTG TTCCGCCAGG TCCATCCGCT GCAAGGTGGC
GAAACCATCC TCTACCACGC GGCGGCCGGC GGCGTGGGGC TGATCGCCTG CCAATGGGCG
CGGGCCCTGG GCGTGACCAT GATCGGCACG GTGAGCACCG ACGAGAAGGC CGCCGCCGCG
CGCGCCAACG GCTGCGCCCA CGTCATCGTG ACCTCGCGCG AGAACACCGT CGCTCGCGTG
ATGGAGATCA CGGGCGGCAA GGGCGTGCCC GTGGTCTATG ACTCGGTGGG CAAGGACACG
CTCATGGATT CGCTGGACTG CCTGCAGCCG CGCGGCCGGC TGGTCAGCAA CGGCACCTCG
TCGGGCTCGG TGGTGGTGGA CTCCCAGTTG CTGGCCGCCA AGGGTTCGAT CTGGATGACG
CGGCCCGCGA TGGTGCACTA CATCCAGCCG CGCGCCCACA TGCTGGAGAT GGCGCGCGAG
CTGTTCGACC ATGTGCTGGC CGGGCGCATC GCCAGCGAGC CCCAGCAAAG CTTTGCGCTG
GCTGATGCGG CCCAGGCGCA CCGGGCGCTG GAGTCGCGCC GCACCACGGG CGCGACGGTG
CTGATTCCCT GA
 
Protein sequence
MAKAIRFHTT GGPEVLRLEH AEAGAPGPGQ ARVRHSFIAV NFIDIYFRTG RYPLALPNGL 
GSDAVGVVEA VGEGVTEVRP GDRVGYLMGP QGAYSDVRVM PAEVLIPLPD GISDRTAATL
MMKGMTAQYL FRQVHPLQGG ETILYHAAAG GVGLIACQWA RALGVTMIGT VSTDEKAAAA
RANGCAHVIV TSRENTVARV MEITGGKGVP VVYDSVGKDT LMDSLDCLQP RGRLVSNGTS
SGSVVVDSQL LAAKGSIWMT RPAMVHYIQP RAHMLEMARE LFDHVLAGRI ASEPQQSFAL
ADAAQAHRAL ESRRTTGATV LIP