| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1980 |
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| Symbol | |
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| ID | 5747538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2162938 |
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| End bp | 2164599 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641297059 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001563005 |
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| Protein GI | 160897423 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGATC CCGTGGGCAT AGGCCCCGAG ATCATCGTCA AACTGGCCAT GGACCCTGCC
CGGCCCCATG CGCCTTTTTT CGTCATCGGC GACACGGGGC GGCTGCAGCG GGCAGCCGAC
ATGCTGGGCG TGCGCCCGCG CATCCAAGCC ATCGATGCGC CGGCCCAGGT TCCCGCCACC
GTGCCACCCG CCACCCTCTT CGTGCTCCAG ACCGGAGGCC CGCTGCCCGA GGACCTGGCC
TGGGGACGCA TCGATGCGCG CGCCGGGGCC GCCTGCCATG CCTACATACA GCGCGGCATC
GACCTGGCCC TGGCCGGCGA AGTCGCAGGC CTGGTGACCG CCCCCATCCA CAAGGAGGCG
CTGCGCGCCG CGGGCTGCCC GCATCCGGGC CATACCGAGA TGCTGGCCGA GCGTTCGGGC
ACGCGCGACT TCGCCATGAT GCTCGCCAAT GACGAGCTGC GGGTGCTGCT GGTCTCCATC
CACGTGCCGC TGCAGCAGGC CATTGCCGCA GTCACGCCGG ACAACGAACT GCGTGCCATC
CGCCTTGCGC ACCAGGCCTG CCGGGCGTTC GGCATCGCCC GGCCCCGTGT GGCCGTGGCG
GGACTCAATC CGCACGCCGG CGAGAACGGG CTGTTCGGGG ACGAGGACCG CTCGGTGATC
ATCCCCGCCA TTGCAGCCGC ACGGGCCGAA GGCATAGACG CCAACGGCCC CTGGCCGGGC
GACACGGTCT TCATGCGGGC ACGCCGGGGC GAGTTCGACG TGGTGGTCGC CCAATACCAT
GACCAGGGGC TGATTCCCGT GAAGTACCTG GGCGTCGAGC AGGGCGTGAA CATTACCGTG
GGCCTGCCCT TCGTGCGCAC CTCGGTGGAC CACGGCACGG CCTTCGACAT CGCCGGCACG
GGCCGTGCGG ACCATGCCAG CCTGGCCTGC GCGCTGCGCC AGGCGGCGGC CATGGTGCAG
GCGGGCCGCT CCGGCGCCAG CGGGCAGGCG CAGCGCCCGG ACTTCATCTT CATGCTCACG
CAGCAGGACA AGACCATTGC CGATGCGCGC GAGCGGCTGC GCGAAGTGCT GGCCCAGGGC
GTGCGCCATG TGGGCTTCAA GGACATAGGC CTGCCCCTGC CACAGCTGCG CGAGCTGGCC
CGGGACATCC GCGCGGGCGG TGCCAGGGTC TATCTGGAAG TCGTCAGCCT GGACGAGGCC
AGCGAGGTGG CTTCGGCCCG CGCGGCGGTG GAGCTCGGTG TGGACGTTCT CATGGGCGGC
ACGCGCCCCG AGGCGGTGCT GCCCGTGCTG CGCGGCAGCG GCATTGCCTA CTATCCGTTT
CCCGGCAGGA TCAGCGGGCA TCCGAGCGTG CTTTCAGGGC CGGCCGAGGA CATCGTGGCC
AGCGCGCGCC GCATCGCGGG GCTGGAGGGC GTTCATGGCC TGGACCTGCT GGCCTACCGT
TTCCGGGGCG ACGTGCCGGC CCTGATCAAG GCGGTCTGCG ATGCGGTGGA CAAGCCCGTG
GTCGTGGCCG GCTCCATTGA TCGCAGCGAA CGCATCGCGG CCGTGCTTGC CAGCGGTGCC
GCGGGTTTCA CGGTAGGCAC CGCCGCCTTC GAGGAGACTT TTCCAGCCGC GCGGCCCGGG
CTGGCGGCGC AGTTGCAGGC CATACAGGCG CTGGTGGACT GA
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| Protein sequence | MGDPVGIGPE IIVKLAMDPA RPHAPFFVIG DTGRLQRAAD MLGVRPRIQA IDAPAQVPAT
VPPATLFVLQ TGGPLPEDLA WGRIDARAGA ACHAYIQRGI DLALAGEVAG LVTAPIHKEA
LRAAGCPHPG HTEMLAERSG TRDFAMMLAN DELRVLLVSI HVPLQQAIAA VTPDNELRAI
RLAHQACRAF GIARPRVAVA GLNPHAGENG LFGDEDRSVI IPAIAAARAE GIDANGPWPG
DTVFMRARRG EFDVVVAQYH DQGLIPVKYL GVEQGVNITV GLPFVRTSVD HGTAFDIAGT
GRADHASLAC ALRQAAAMVQ AGRSGASGQA QRPDFIFMLT QQDKTIADAR ERLREVLAQG
VRHVGFKDIG LPLPQLRELA RDIRAGGARV YLEVVSLDEA SEVASARAAV ELGVDVLMGG
TRPEAVLPVL RGSGIAYYPF PGRISGHPSV LSGPAEDIVA SARRIAGLEG VHGLDLLAYR
FRGDVPALIK AVCDAVDKPV VVAGSIDRSE RIAAVLASGA AGFTVGTAAF EETFPAARPG
LAAQLQAIQA LVD
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