| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1929 |
|---|
| Symbol | |
|---|
| ID | 5747487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 2123467 |
|---|
| End bp | 2124114 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641297008 |
|---|
| Product | peptidase S24/S26 domain-containing protein |
|---|
| Protein accession | YP_001562954 |
|---|
| Protein GI | 160897372 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0221761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000000154774 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGATA CTTATTGGGA GCGGCTACTT CCTGAGCTAG AGGCTCGCGG CTGGAAGATC
CAGCAGCTGG CTGACGCCAT GAAGATCAGC TATCAGGCAG TCAGGAAAGT GAAGGAAGGC
GGCAGCTTCA GTTCACAGAA CAACATCAAG GCGGCGAAGC TGTTCAGGCT GAACCCCGCA
TGGCTTGCGA CAGGCGTTGG ACCGAGGGAA ATGGACGGCA CTGACGAAGA TGACGACACC
TTAGGCAAGG TGCCGCTGAT CTCTTCTGTC CAGGCGGGCA ACTGGTCGGA AATTGTGGAT
AACTTCCAAC CAGGGGATGC ATCTGAATGG ATACCCTGCC CTGCAAAGCA CGGTCCACAC
ACATTCGCGC TGACGGTAGA AGGCGAGAGC ATGAGCAATC CCGGCGTACA TCCTTCATAC
GAGCCGGGAA ACATCATCTT TGTCGATCCA GGCAGATCAG CGCAGCCAGG AGATCGGGTA
GTCGTTCGAC TCGAAGCCCA GGATCAGGCG ACGTTCAAGC AATACCTTGA AGAGGACGGC
CGAAAGTTCT TGCGGGCCAT CAACCCCGAC TGGCGACCAA AGTTCATCGA GATAAACGGG
GACGCCACGA TCTGCGGCGT TGTCATAGGC AAGTGGGTTC CAGAATAG
|
|---|
| Protein sequence | MVDTYWERLL PELEARGWKI QQLADAMKIS YQAVRKVKEG GSFSSQNNIK AAKLFRLNPA
WLATGVGPRE MDGTDEDDDT LGKVPLISSV QAGNWSEIVD NFQPGDASEW IPCPAKHGPH
TFALTVEGES MSNPGVHPSY EPGNIIFVDP GRSAQPGDRV VVRLEAQDQA TFKQYLEEDG
RKFLRAINPD WRPKFIEING DATICGVVIG KWVPE
|
|---|
| |