| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1906 |
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| Symbol | ispH |
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| ID | 5747463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2107565 |
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| End bp | 2108563 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641296984 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001562931 |
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| Protein GI | 160897349 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.688735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000396961 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCTGGATT CGACCTCGCC CCAGGAAATC CTGCTGGCCG AGCCCCGGGG CTTCTGTGCC
GGCGTGGACC GCGCCATCGA GATCGTGGAG CGTGCGCTGG CCAAGTTCGG CGCGCCCATC
TACGTGCGCC ACGAGATCGT GCACAACACC TTCGTGGTCA ACGATCTCAA GGCCAAGGGA
GCGATCTTCA TCGAGGAGCT GGACGACGTG CCGCCCGGCT CCACCCTGGT GTTCAGCGCC
CACGGCGTGA GCCGGGCGGT GCAGGAAGAG GCGCGGCGGC GCGGTTTCTC CATCTTCGAC
GCCACCTGCC CGCTGGTGAC CAAGGTGCAT GTGGAAGTGG CCAAGCTCGC CAAGGAAGGC
TACGAGTTCC TGATGATCGG CCACAAGGGG CATCCCGAGG TCGAGGGCAC CATGGGCCAG
CTGTCCGAGG GCATCCACCT GGTCGAGGAC GAGGCCGATG TGGCCCGTGT CACCCCCCGC
CAGACCGAGA AGCTGGCCGT GGTCACGCAG ACCACGCTGT CGGTGGACGA TGCCGCCGGC
ATCACGGCGG CCATCCGCGC GCGCTTTCCG CAGGTGCGCG AGCCCAAGCA GCAGGACATC
TGCTATGCCA CGCAAAACCG CCAGGACGCC GTCAAGGTGC TGGCGCCGCA GGTGGATGTG
CTCATCGTGG TGGGCAGTCC CACCAGTTCC AACAGCAACC GGCTGCGCGA GCTGGCCGCG
CGCCTGGGAA CGCCCGCCTA CATGGTGGAC AACGCGGGCG AGCTGTGCGA GGAATGGTTT
GCCAATGCCG GGCGCGTGGG CCTGACGGCC GGGGCCTCCG CACCCGAAGT GCTGGTGGAC
GAGGTCATCC AGCGCCTGCG CCAGCTGGGC GCGCTGTCGG TGCGCAAGAT GGATGGCATC
GAGGAGACCG TGAAGTTCCC GCTGCCCAAG GGCCTGAAGA TCGACGCGGC CACGGGCCTG
GAGATCTCCG TGGGCAAGCA GCCCGAGACG GGCGGCTGA
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| Protein sequence | MLDSTSPQEI LLAEPRGFCA GVDRAIEIVE RALAKFGAPI YVRHEIVHNT FVVNDLKAKG
AIFIEELDDV PPGSTLVFSA HGVSRAVQEE ARRRGFSIFD ATCPLVTKVH VEVAKLAKEG
YEFLMIGHKG HPEVEGTMGQ LSEGIHLVED EADVARVTPR QTEKLAVVTQ TTLSVDDAAG
ITAAIRARFP QVREPKQQDI CYATQNRQDA VKVLAPQVDV LIVVGSPTSS NSNRLRELAA
RLGTPAYMVD NAGELCEEWF ANAGRVGLTA GASAPEVLVD EVIQRLRQLG ALSVRKMDGI
EETVKFPLPK GLKIDAATGL EISVGKQPET GG
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