Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1890 |
Symbol | |
ID | 5747447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2091819 |
End bp | 2093285 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641296968 |
Product | transcriptional regulator |
Protein accession | YP_001562915 |
Protein GI | 160897333 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.278936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCACGGCC GGATCTTCCA TAGACAGTCC AATACAATTC AAAAGAACTG TTATGCACAC AAAACCACTA CAGAAGAAAG AGCAGCCATG CGCAGCGGCA CACGCATCCA GGCGGTGATG GAAGAGATCC AGTCGCGCAT CGCCGCGCGC ACCTACCTGC CCGGCACGCG CCTGCCCTCG GTGCGCGCGC AGGCGCAGGC CATGCAGGTG TCGGTGTCCA CGGTGGTGGA GGCCTATGAG CGGCTGGCGG CCGAGGGGGT GATCGTCTCG CGCCCGGGCT CGGGCTTTTA TGTGGCGGGG CCGGTGGCAC CGCTGGCGCT GGGCGGTATC GGGCCGCGCG TGGACAGGGA GGTCGACCCC CTGTGGCTGG CCCGCCAGTC GCTGCAGGCA GATGCCCACG CGCTCAAGCC GGGCTGCGGC TGGCTGCCTC CTTCATGGCT GTACGAGGAA GGCGTGCGCC GCGCGCTGCG CTCCCTGGCG CGCTCGGGCA CGCTGGAGCT GACGGAGTAC GCAACGCCGC TGGGCCACCC GGCACTGCGC CGCCTGCTGG CGCGGCGCAT GGCCGCCATG GGGCTGGAGA CCTCGCCCGA GCAGATCCTG CTGACGGAGT CGGGCACGCA CTCCATCGAC CTGGTCTGCC GTTTCCTGCT GGAGCCCGGC GATACGGTGC TGATCGACGA CCCCTGCTAT TTCAATTTCC ATGCGCTGCT CAAGGCGCAC CGCGTGCAGG CCGTGAGCGT GCCCTACACG CCGCAGGGGC CCGACGTGGC CCGGTTCGCC GACGCGCTGC AGGCACATTC GCCACGCCTG TACATCACCA ATTCGGCCAT CCACAACCCG ACGGGCGCCA CGCTGTCGCC ACTGGTGGCG CACCGCATCC TGAAGCTGGC CGACAGCTCG GACCTGGTGA TCGTGGAGGA CGACATCTTC TGCGACCTGG AGACCCATGC GGCGCCCCGG CTGGCGGCCT TCGACGGCCT GTCGCGCGTG ATCCAGATCG GCAGCTTCTC CAAGACGGTG TCGGCCTCGC TGCGCTGCGG CTTCATCGCG GCGCGGCCCG ACTGGACGCA GGACCTGGCG GACCTGAAGA TCGCCACCAA CTTCGGCGGC GGGCGCATGG CCGCCGACAT CGTGCTGCGC ACGCTGACCG ACAGCGGCTA CCGCAGGCAC ATGGAGTCCG TGCGGCTGCG GCTGGCGCAG GAGATGGAAC GCACGGCCGC GCGGCTGCAG GCCCTGGGCA TGAAGCCCTG GCTGGTGCCG CAGGCCGGCA TGTTCCTGTG GTGCCAGTTG CCCGGGGGCA TGGATGCCAC GGCGCTTGCA CGCACCTGCC TGGAGGATGG CGTGGTGCTG GCGCCCGGCA ATGCCTTCAG CCAGTCGCAG AGCGCAGGCG ACTTCCTGCG CTTCAATGTG GCGCAGTGCT CGGATGCGCG GATCTTCGAG GTGCTGGCGC GGGCGCTGAA GGGCTAG
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Protein sequence | MHGRIFHRQS NTIQKNCYAH KTTTEERAAM RSGTRIQAVM EEIQSRIAAR TYLPGTRLPS VRAQAQAMQV SVSTVVEAYE RLAAEGVIVS RPGSGFYVAG PVAPLALGGI GPRVDREVDP LWLARQSLQA DAHALKPGCG WLPPSWLYEE GVRRALRSLA RSGTLELTEY ATPLGHPALR RLLARRMAAM GLETSPEQIL LTESGTHSID LVCRFLLEPG DTVLIDDPCY FNFHALLKAH RVQAVSVPYT PQGPDVARFA DALQAHSPRL YITNSAIHNP TGATLSPLVA HRILKLADSS DLVIVEDDIF CDLETHAAPR LAAFDGLSRV IQIGSFSKTV SASLRCGFIA ARPDWTQDLA DLKIATNFGG GRMAADIVLR TLTDSGYRRH MESVRLRLAQ EMERTAARLQ ALGMKPWLVP QAGMFLWCQL PGGMDATALA RTCLEDGVVL APGNAFSQSQ SAGDFLRFNV AQCSDARIFE VLARALKG
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