| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1878 |
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| Symbol | |
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| ID | 5747435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2075671 |
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| End bp | 2077839 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641296956 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001562903 |
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| Protein GI | 160897321 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCA TGACGCACCA CAGCACTCCT GCGGACTTCC GCTTCGCCCC CCACCCCCTC
ACGCGCCTGA TCCGCCAATG CCTGGGCGCC GGCCTGGCCC TGGCCGCCGT GGGCGTGGCG
GCCCAGACGG CCGAGGGCCC GGCCCTCAAG GAGGTGACGG TGAGCGACCA GGCCGAGGCC
ATCGGCGGAC TGCAAAAGAC CTATGCCGGC GGCCAGATCG CGCGCGGCGG CGACCTGGGC
ATCCTGGGCA AGACCGACCA GATGAACGTG CCCTTCAGCA CGACCAACTA CACCTCGGAG
CTGATCGAGA ACCAGCAGGC GCTGACCATC GCCGACGTGG TGATGAACGA CGCCTCGGTG
CGCACGCTGC AGGCGCGCGG CGGCTATGGC GATGACTTCC AGGTGCGGGG CTTTTCCCTG
TCCATGCGCG ATGTGTCGGT GAACGGCCTG TACGGCCTGT CGCCCTCCAC GCGCCTGCCG
CTGGAGGTGA TCGAGCGCGT GGAAGTGCTC AAGGGCCCCG GCTCGCTGAC CAATGGCGTG
GGCCCCAGCG GCAGCATCGG CGGCAGCATC AACGTGGTGA CCAAGCGCGC GGGCGACGTG
CCGCTGAACC GCCTGACCGC CACCTACATG GGCAAGGCCC AGTTCGGCAC CCACCTGGAC
GTGGGCCGCC GCTTTGGCGA AGACAACCAG TGGGGCGTGC GCGTGAACGG CGTGTGGCGC
AACGGCGAAG GCAATATCGA CGGCGGCCGC CAGCGCCTGG GCCTGGCATC GGTGGGCCTG
GACTACGAAG GCCAGGGCCT GCGCTGGTCG CTGGACGCGC TGACCACCAG CGGCAAGACC
ACGGAATTCC GCCCGCAAAG CGCCTTCCTG GCCGGCATCA CCCAGGTGCC CGCCGTACCC
GACAGCCGCA CCAACTTCAA CCCGGGCACG GAGCTGCTGG ACAAGGCCAA GACCGTGATC
TCGCGTGTGG AATACGACAT CAACGCCAAC ACCTCCGTCT ACGGCGGCGT GGGCTACAGC
GATGTGTCCA GCGACCAGAG CTTTCCCACG GCCGTGCAGC GCATCGACTC GCTGGGCAAC
TTCACGGTGC GCAACGGCTT CTACGACGAG TTCAACAAGA CCACCTCGGC CGACGTGGGC
CTGCGCACGC GCTTCAAGAC CGGCGCCATC GGCCACACCG TGGTGGCCGC GGCCAACTAC
ATGGACCGCG AGAGCGGCTA CTTCTACCAG CTGACCACCA AAGCCGTCCC CTCCAACATC
TACAACCCCG CGCCCCTGCC TGCCATCGAC TTCGTGCGCG GCGCGCCCAC CAAGAATGCC
GAGCTGACGC AGCACAGCCT GGCGCTGGCC GACACCATGG CGCTGTTCAG CGACCGCGTG
CTGGTGACCG TGGGCCTGCG CGACCAGACC ATCGACCAGA AGAACGCCAG CGGCACCACG
CTGTACAAGG CCAGCGCCGT GACGCCGCTG GCCGGCGTGG TGTTCAAGCC GCAGAACAAT
GTCTCGGTCT ACGCCAACTA CACGGCTGGC CTGTCGGCAG GCGGCACGGC CGGGCCCAAT
ACGGCCAATG CCGGCCAGGT GTTCGCGCCG CAGAAGTCCA AGCAGTACGA AGTGGGCGTG
AAGGTGGACT GGGGCCGCAT GACCACGCAG GCCGCGCTCT ACCAGATCCA GCGCCCGGGC
TCCATGACAG ACCCGGTGAC CAATGTCTAC AGCTTCGGCG GCGAGACGCG CAACCGCGGC
CTGGAGCTGA CCGCCTACGG CGAGATCCAG AAAGGCCTGC GCCTGCTGGC CAGCGCGGCC
TTCAACAACG CCAAGCTCTC GCGCACGGCA GGCGGCGTGA ACCAAGGCAA CGATGCCAAC
GGCGTGCCCG AGCGCACCTT CAACCTGGGC CTGGACTGGG ATACCCCCTG GGTGGAGGGC
CTGAGCCTGA ACGGCCGCGT GATCCACACC TCGTCCATGT ACTACGACGC GGCCAACATC
CTGCGCATGC CCGGCTGGAC ACGCCTGGAC CTGGGCGCAC GCCTGCGCAC CCACGTGGCC
GGCAAGCCGG TGGTGCTGCG CGCCAGCCTG GAGAACGTCA GCAACAAGAG CTACTGGGTG
ACTGCCGCCG GCTACACCAC CACGGGCGCG CCGCGCACGC TGATGCTGTC GGCACAAGTG
GACTTCTAA
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| Protein sequence | MTAMTHHSTP ADFRFAPHPL TRLIRQCLGA GLALAAVGVA AQTAEGPALK EVTVSDQAEA
IGGLQKTYAG GQIARGGDLG ILGKTDQMNV PFSTTNYTSE LIENQQALTI ADVVMNDASV
RTLQARGGYG DDFQVRGFSL SMRDVSVNGL YGLSPSTRLP LEVIERVEVL KGPGSLTNGV
GPSGSIGGSI NVVTKRAGDV PLNRLTATYM GKAQFGTHLD VGRRFGEDNQ WGVRVNGVWR
NGEGNIDGGR QRLGLASVGL DYEGQGLRWS LDALTTSGKT TEFRPQSAFL AGITQVPAVP
DSRTNFNPGT ELLDKAKTVI SRVEYDINAN TSVYGGVGYS DVSSDQSFPT AVQRIDSLGN
FTVRNGFYDE FNKTTSADVG LRTRFKTGAI GHTVVAAANY MDRESGYFYQ LTTKAVPSNI
YNPAPLPAID FVRGAPTKNA ELTQHSLALA DTMALFSDRV LVTVGLRDQT IDQKNASGTT
LYKASAVTPL AGVVFKPQNN VSVYANYTAG LSAGGTAGPN TANAGQVFAP QKSKQYEVGV
KVDWGRMTTQ AALYQIQRPG SMTDPVTNVY SFGGETRNRG LELTAYGEIQ KGLRLLASAA
FNNAKLSRTA GGVNQGNDAN GVPERTFNLG LDWDTPWVEG LSLNGRVIHT SSMYYDAANI
LRMPGWTRLD LGARLRTHVA GKPVVLRASL ENVSNKSYWV TAAGYTTTGA PRTLMLSAQV
DF
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