Gene Daci_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1868 
Symbol 
ID5747425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2066076 
End bp2067068 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content68% 
IMG OID641296946 
Producthypothetical protein 
Protein accessionYP_001562893 
Protein GI160897311 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGTGA AACGCCGTTT TCTGACCGCC GCAGCCGCAG GCCTGTGCCT GTCCGCCGTG 
ATGCCCGCCG CCCATGCGCA GGCCCCCGAG GCCAACTGGC CCAGCAAGCC CATCCGCTGG
ATCGTGCCCT TCCCGCCGGG CGGCGCCATG GACGCCATTG CGCGCACCCT GGGCGAGAAA
GCCGGCCGCA CGCTGGGCCA GCCCTTCGTG ATCGAGAACC GTCCCGGCGC CGGCGGCAAC
ATCGGCGCCG ACTTCGTGGC CAAGCAGCCC GGCGACGGCT ACACGCTGAT GATCACCTCC
ATCGGCATGG CCACCAACAA GCCGCTGTAC CGCAAGCTCA GCTACGACCC GATCAAGGAC
TTCGCCCCCG TGGGCGTGCT GGCCGTGGTG CCCAACATCC TGGTCACCAA CTCCACCCAG
CCCAACGTCA AGAGCGTGGC CGACGTGGTG GCCGCCGCCA AGGCCTCGCC CGGCAAGCTG
ACCTATGCCT CGGCCGGCAA CGGCACTTCC ATCCACCTGG CAGGCGAAGT GTTCAACTCG
CTGGCCGGCG TGGACATCCT GCACATCCCC TACAAGGGAT CGGGCCCGGC CGTCTCCGAC
CTGCTGGGCG GACAGGTCAA CTACATGTTC GACTCCATCA CCTCGGCGCG CCCGCACATC
CAGTCGGGCA AGCTGCGCGC CCTGGCCGTG ACCACGGCCA AGCGTTCGTC CAGCATGCCC
GACGTGCCCA CCATGGAAGA GGCCGGCATC AAGGGCTACG AGGTCTCGCC CTGGTTCGCC
GTCTTCATGC CCGCCAGCAC GCCGCCGGCC ATCGTCAAGA AGCTCAACCA GGTCTTCGTA
GCCGAGATGA AGCAGCCCGA CGTGCTCGAA CGCTTCAAGG CCATCGGCGC CGAGGTCGTG
GGCTCCACCC CCGAGGAAGC GGCCAAGCAC CTGCAGGCCG AGTCCGTGCG CTGGACCAAG
GTGATCACGG AGCGCAACAT CAGCATGGAC TGA
 
Protein sequence
MNVKRRFLTA AAAGLCLSAV MPAAHAQAPE ANWPSKPIRW IVPFPPGGAM DAIARTLGEK 
AGRTLGQPFV IENRPGAGGN IGADFVAKQP GDGYTLMITS IGMATNKPLY RKLSYDPIKD
FAPVGVLAVV PNILVTNSTQ PNVKSVADVV AAAKASPGKL TYASAGNGTS IHLAGEVFNS
LAGVDILHIP YKGSGPAVSD LLGGQVNYMF DSITSARPHI QSGKLRALAV TTAKRSSSMP
DVPTMEEAGI KGYEVSPWFA VFMPASTPPA IVKKLNQVFV AEMKQPDVLE RFKAIGAEVV
GSTPEEAAKH LQAESVRWTK VITERNISMD