Gene Daci_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1762 
Symbol 
ID5747320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1960755 
End bp1961666 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content73% 
IMG OID641296842 
Product(acyl-carrier protein) S-malonyltransferase 
Protein accessionYP_001562789 
Protein GI160897207 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR03131] malonate decarboxylase, epsilon subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTG CACTGCTGTT TTCGGGCCAG GGTACGCAGC ATCCCGCCAT GCTCCCCTGG 
CTGGCGGACG ATGCATGGAC ACAGGCAGTC TGCGAACAGC TGCAGGTTGC GCACTGGCGC
GACAGGTTGG CCGATGCGCC GTGGGCCGAG TCCAACGCCG TGGCCCAGCC GCTGCTGGCG
GGCCTGGCCA TGGCCGCGTG GATGCAGCTG TCCCCGCAAC TGCCCGCGCC TTCGGCCGTG
GCGGGCTACA GCGTGGGGGA ACTGCCCGCA TTCGGTGCCG CGGGCGCGCT GGATGCCTGC
GACATCGTTG CCCTGGCCGC GCGCCGCGCG GCGGCCATGG ACCGCTGCTC GCAGCAGATG
CCCGGCGGCG GACTGCTGGC CGTCAGCGGC CTGCCGCCCG CACGCATGGC CGCCTTGCTG
GAGACGACCG GGCTGGCCGT GGCCATACGC AACGGCCCCG AGAACCTCAT CCTGGGCGGC
CCCCATGCGG CGCTGGAGCA GGCGCAGGCG CTGGCGGCCC GCCAGGGCGC GCATGCCACC
CGGCTGCGCG TGCAGGTGGC TTCCCACACC CCGTGGATGC GACAGGCCGC ACAGGCCTTC
GCAAAGGACC TGGGCCAGGT GGCCGTGCAC GCGCCCGCCG TGGCGCTGTT CAGCAACACG
GCCCGGCGGG TGCGTGACGC CGCAGGCGCC CGGACGGCGC TGTCAGAGCA GATAGCGGGC
ACGGTGCACT GGGACGACTG CATGGACAGC GTTGCCGCAC GCCAGGTGCG CTGCGTTCTG
GAAATCGGCC CCGGCCAGGC GCTGGCACGC CTGTGGAACC AGCGCCATCC GGACATTCCG
GCCCGCTCCT GCGACGACTT CCGCAGCGCG GCGGCCATTG CCAGCTGGAT AGGCCGGCAC
TGCGGGGACT GA
 
Protein sequence
MSFALLFSGQ GTQHPAMLPW LADDAWTQAV CEQLQVAHWR DRLADAPWAE SNAVAQPLLA 
GLAMAAWMQL SPQLPAPSAV AGYSVGELPA FGAAGALDAC DIVALAARRA AAMDRCSQQM
PGGGLLAVSG LPPARMAALL ETTGLAVAIR NGPENLILGG PHAALEQAQA LAARQGAHAT
RLRVQVASHT PWMRQAAQAF AKDLGQVAVH APAVALFSNT ARRVRDAAGA RTALSEQIAG
TVHWDDCMDS VAARQVRCVL EIGPGQALAR LWNQRHPDIP ARSCDDFRSA AAIASWIGRH
CGD