| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1754 |
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| Symbol | |
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| ID | 5747312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1948429 |
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| End bp | 1949589 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641296834 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001562781 |
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| Protein GI | 160897199 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.86382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAA GACCTCGGAT CTACTACACC GAAGTACAGA AAGCGATGAT GTGGGATCGC
TGGAGCAAGG GCGATACCCT GCACCAGATC GGCAAGCTGT TCGATCGACC ACATACCTCC
ATTCAGAACA TCCTGGCCGC AACCGGCGGA ATCCGCTCGC CAGCGCGCCA TCGGTCCCGA
TTGGCACTGA CCCTCACTCA GCGCGAGGAG ATCTCGCGAG CTCTGGCAGT GGGCGAATCC
ATTCACTGCG TGGCTGCACG CTTGGGTCGA GCCGCATCCA CCGTCAGCCG TGAGCTTCAC
CGCAACGGTG GCAAGACTTG CTACAGGGCT GCTCGGGCCG ACGAAGCTGC CTGGGAGCGT
GCACACCGCC ACAAGCCTTG CAAGCTGGCG AGCAATCCAG CCCTGGCACA GATCGTAGCG
GGCAAACTGC AGCATCAATG GTCGCCGGAA CAGATCGCAG GATGGCTTAA ACAGACTTAC
CCGGGGGAAA GGGACTTGCA GCTGTCGCAT GAAGCCATCT ATCGCACGCT CTTTGTCCAG
ACGCGGGGTG CCTTGAAGAA GGAACTTCTC GAGCATCTGC GGCGCACCAG AGGCATGCGT
CGTTCACGGC ACTACACGCA GAAGACCAGC ATTCATGGCC GAATCGTCGA TGCCGTTCCC
ATCGCTGAAC GCCCAGCCTG CATTGAGGAC CGAGCCGTGC CGGGGCATTG GGAGGGAGAC
TTGCTGTTCG GCGATGCCCA TAGCCAGATC GCGACCTTGG TGGAGCGACA CACGCGTTAT
GTGATGCTGA TCAAGCTGGT GGACAAAGAC TCGTACACCG TGGCTGCGGC CCTGGCCAGG
CATGCCAGGA GCCTGCCGCA TGAGCTCTAC CGCTCCTTGA CTTGGGATCG CGGCTCGGAA
ATGGCAGGGC ACAAGCGCTT CACGTTGGCG ACCGACATCC AGGTCTACTT CTGTGACCCG
CACCATCCAT GGCAGCGGGG TACCAACGAG AACACGAACG GGTTGCTCAG GCAGTACCTC
CCCAAAGGGC TTGATCTGTC AGGCTACTCG CAGGAAGGAC TGGATGCGAT TGCAAGGCAA
TTGAACCAAC GTCCCAGGAA GACACTGGGG TTCAGCACAC CTGCTGAAAT GTTTGATGAG
TGTGTTGCGT TGACCGGTTG A
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| Protein sequence | MQQRPRIYYT EVQKAMMWDR WSKGDTLHQI GKLFDRPHTS IQNILAATGG IRSPARHRSR
LALTLTQREE ISRALAVGES IHCVAARLGR AASTVSRELH RNGGKTCYRA ARADEAAWER
AHRHKPCKLA SNPALAQIVA GKLQHQWSPE QIAGWLKQTY PGERDLQLSH EAIYRTLFVQ
TRGALKKELL EHLRRTRGMR RSRHYTQKTS IHGRIVDAVP IAERPACIED RAVPGHWEGD
LLFGDAHSQI ATLVERHTRY VMLIKLVDKD SYTVAAALAR HARSLPHELY RSLTWDRGSE
MAGHKRFTLA TDIQVYFCDP HHPWQRGTNE NTNGLLRQYL PKGLDLSGYS QEGLDAIARQ
LNQRPRKTLG FSTPAEMFDE CVALTG
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