Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1742 |
Symbol | |
ID | 5747300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1934933 |
End bp | 1938064 |
Gene Length | 3132 bp |
Protein Length | 1043 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641296823 |
Product | CzcA family heavy metal efflux protein |
Protein accession | YP_001562770 |
Protein GI | 160897188 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.415877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAACT GGGTCGTTAG AAATAGCCTC CACAACCGGC TGTTCGTACT GGTCTTTGCG GCCATTTTGC TGGTCTATGG AGCCATTACC GCTTGGCGCA CGCCGGTGGA TGTGTTCCCG GACCTCAATA AGCCGCTTGT CACCGTCCTC ACCGAGGCCG GCGGCATGGC CCCTGAAGAA GTGGAGCAAC TCGTCACCTT TCCGTTGGAG ACGGCGCTCA ACGGGATGCC CGGCGTGACA CGGGTTCGCT CCATGTCCGG AGTGGGTCTG TCCATCGTCT ACGCAGAGTT CGACTGGGGC ACCGACGTAT ACCGCAACCG ACAGTTGGTA TCGGAGAGAC TTTCACTCGC TCGCGAGCGA CTCCCTGCCG ACGTCAATCC GATGATGGGG CCAGTCTCAT CCATCATGGG CGAAATCATG CTGCTCGCGC TTCCGCTGCA GGGCACTGAG GGAGGAACGG CCACGCCGAT GGAGGCACGG GAGTACGCCG ACTTTGTGCT GCGACCACGG CTGTTGTCGA TTCCTGGCAT CTCACAGGTG ATCCCCATCG GGGGCGATGT ACGTCAGCTC CGGGTCGAGC CCGACACCGC AAGGATGGCG CAGTTTGGAG TGTCGCTCAC GGAGGTCGAG GACGCCTTGC GCGGGTTCTC GTCCAATGCG GGGGGCGGCT TTATCGACCT GAACAGTCGT GAGTTCCTCA TTCGGCATGT AGGACGAACG AACCGTGTTG AAGACTTGCA GGGCATTGCT GTTGCATGGA GAAACGGTCG CTCCATTCTC TTGGAGCAGG TTGCACAGGT CTCCTTTGCC GCTGGTATGA AACGTGGTGA TGGCGGCTAC AACGGCGCGC CTGCTGTGGT CGTCAGTGTG CAAAAGCAAC CTGCGGGCGA CACAGTCGTT CTGACGCAAG CCATCGAGTC GGCTTTGGAA GAGCTCAAGC AAGGCCGCCC AGCTGGCCTG CAAGAGCCGC GTGTGTTGTT CAAGCAGGCG GATTTCATCA AGGCGTCCGT GGGGAACGTC AGTGAAGCGC TCCGTGACGG CGCCATCATG GTAGCCATCG TGCTCTTTGC GTTCCTGCTA TCAGCGCGGA CCACACTTAT CTCCCTCGTC GCCATCCCGC TCTCGCTGGC GGTGACGGCG GTAGTCTTCA AGCTGCTCGG ACAGTCCATC AATGTGATGA CATTGGGAGG CCTGGCCATC GCCATTGGCG AGCTGGTCGA CGATGCTGTC GTGGACGTGG AAAACATCCT GCGACGGCTG AAGCAGAACC GCCAGTTGCC CAGGCCACTG TCGACCATGG AGGTGGTACG CCACGCCAGT ATCGAAGTGC GCTCAGGCAT CGTTTACGCC ACCATCATCG TGTGTCTGGT GTTCGTTCCT CTGTTCGCTC TTCCCGGCAT CGAAGGGCGG CTCTTCACAC CGCTGGGCAT TGCCTACATC GTCTCCATCC TGGCATCGAT GCTGGTGTCC ATGACCGTCA CGCCGGTGAT GAGCTCCTAC CTGCTGCCAA AGATGCGCCG TATTGACCAT GGTGACAGCA CATTGGTCAC GCATTTGAAG CGCTGGGATG AGGCGCTGCT GAGCTGGTCC TTTCCGCGCA CCAAGATACT GCTTTGCGCG GCAGCTTTGG CCGTTGCCGG TGCAGCAGCG AGCGTGCCAT TCTTCCCGAG GGCGTTTCTG CCGGCTTTCA ACGAAGGCTC CCTGGTTCTC GGAATGGTCT TCAACCCCGG GACATCACTG GCAGAGGCTA ACCGGATGGG CTCACTGGCT GAAACACTCA TCAAGGAGGT TCCAGAGGTA ACGCAGGTGG GGCGTCGTAC CGGACGTGCG GAGCTGGACG AGCATGCGGA GGGTGTGCAC TCTGCAGAAA TCGATGTCGA CCTTCGCCGT AGTCAGCGGG ACCGAGAAGC CATCATGGCT GACATCCGCG GCAAGCTTTC CGTCTTGCCC GCGCAAGTTG CCGTTGGCCA GCCCATCTCA CACCGGTTGG ACCATCTCTT GTCGGGCGTT CGCGCGCAGA TTGCAGTCAA AGTTTTCGGT GACGACACTG ACACCCTACG TGGTTTGGCG GAGCAACTAC GCCTGGGGAT GTCGACCATT CCTGGCGTGG TGGACTTGTC TGTTGAGAAA CAGGTGCTTA TTCCCCAAAT CACGGTGCGC ATCGACCAGC GCAAGGCAGC GCAGGCAGGC ATCTCTCCCG GGGAAGCCGT CCGTATCCTC CAAGCCCTGA CAGATGGAGC ACACAGCGCG CAAATTGTCG ATGGCGTAAA GCGGTACGAG TTGGTGCTGC GTTTGCCAGA TGGGGCTCGA ACGCCCCAGG ACCTGGAGCG TACCCTCATC GATACTCCGT CGGGACGTAT CCCTGTGTCT TCCATCGCGA CGGTCGAGCA GAACGACGGC CCAAACCAGA TTGGCAGGGA GAACGGGAGG CGCCGCATTG TTGTCTACGC GAACACGGAT GGCAACGATA TGAGCTCCAT CGTGAGCAAT ATCCGGAGCG TGATTGGCGG GGTGACGCTG CCGGCTGGCG CGTTCATCAG CCTTGAGGGA CAGTTCCAAG CTCAGGAGCA GGCCGCGCAA CTGATTGCCA GTCTATCCGT GCTGTCCCTG TTGCTGGTGT TCCTGGTCCT GTACTCCCGG TACAAGTCTG TCACGCTGGC GGCCATCATC ATGGCGAACA TCCCCCTCGC CTTGATAGGC AGTGTGGTCG CCATGTGGAT TGGAGACATC AGCCTCTCTG TTGCCTCAAT GGTGGGCTTC ATCACGCTGG CCGGCATCGC GACGCGCAAC GGCATCCTCA AGGTCAGCCA TTACATCAAC CTCTGCAAGT TCGAGGGGGA GACGTTTGAC CAGGCCATGG TTGTACGCGG CTCACTGGAA CGATTGACTC CAGTCCTGAT GACTGCGCTC GTTGCCGCGT TTGCTCTGAC TCCTTTGCTG CTGTCTGCCG ACGCACCCGG CAAGGAAATT CTGCACCCAG TGGCTGTCGT CATCTTCGGC GGTTTGGTGA GTTCAACGCT ACTCGACACA TTGATGACAC CGCTGATGTA CCTGCGGTTC GGTCGCAAGG CGACAGAGCG TCTCATCACC GACCAACCGG AAGAATCTCA CGACGTTCAA CACGCGTACT GA
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Protein sequence | MFNWVVRNSL HNRLFVLVFA AILLVYGAIT AWRTPVDVFP DLNKPLVTVL TEAGGMAPEE VEQLVTFPLE TALNGMPGVT RVRSMSGVGL SIVYAEFDWG TDVYRNRQLV SERLSLARER LPADVNPMMG PVSSIMGEIM LLALPLQGTE GGTATPMEAR EYADFVLRPR LLSIPGISQV IPIGGDVRQL RVEPDTARMA QFGVSLTEVE DALRGFSSNA GGGFIDLNSR EFLIRHVGRT NRVEDLQGIA VAWRNGRSIL LEQVAQVSFA AGMKRGDGGY NGAPAVVVSV QKQPAGDTVV LTQAIESALE ELKQGRPAGL QEPRVLFKQA DFIKASVGNV SEALRDGAIM VAIVLFAFLL SARTTLISLV AIPLSLAVTA VVFKLLGQSI NVMTLGGLAI AIGELVDDAV VDVENILRRL KQNRQLPRPL STMEVVRHAS IEVRSGIVYA TIIVCLVFVP LFALPGIEGR LFTPLGIAYI VSILASMLVS MTVTPVMSSY LLPKMRRIDH GDSTLVTHLK RWDEALLSWS FPRTKILLCA AALAVAGAAA SVPFFPRAFL PAFNEGSLVL GMVFNPGTSL AEANRMGSLA ETLIKEVPEV TQVGRRTGRA ELDEHAEGVH SAEIDVDLRR SQRDREAIMA DIRGKLSVLP AQVAVGQPIS HRLDHLLSGV RAQIAVKVFG DDTDTLRGLA EQLRLGMSTI PGVVDLSVEK QVLIPQITVR IDQRKAAQAG ISPGEAVRIL QALTDGAHSA QIVDGVKRYE LVLRLPDGAR TPQDLERTLI DTPSGRIPVS SIATVEQNDG PNQIGRENGR RRIVVYANTD GNDMSSIVSN IRSVIGGVTL PAGAFISLEG QFQAQEQAAQ LIASLSVLSL LLVFLVLYSR YKSVTLAAII MANIPLALIG SVVAMWIGDI SLSVASMVGF ITLAGIATRN GILKVSHYIN LCKFEGETFD QAMVVRGSLE RLTPVLMTAL VAAFALTPLL LSADAPGKEI LHPVAVVIFG GLVSSTLLDT LMTPLMYLRF GRKATERLIT DQPEESHDVQ HAY
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