Gene Daci_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1718 
Symbol 
ID5747276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1912670 
End bp1914436 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content44% 
IMG OID641296799 
Productsulfatase 
Protein accessionYP_001562746 
Protein GI160897164 
COG category[R] General function prediction only 
COG ID[COG2194] Predicted membrane-associated, metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.292423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCCT CTTTAGAACA ACGTTCTCTT GAGGAAGGCT TTCTGCGTTT GGCTCAAGCA 
AAAGAGCTAG TCATGAAAAA TAATAATCAA AGCTTTCTAC AGAAAATATC AGCGCACCTG
ACAGTTGGCC CAGCTCTTTT AATCATTGCG ACAGGACTGT GGATCGCGAC CATTGGAAAT
ATTCCATTGT GGAAAGCTCT GAGCCAACTG CCTGAAGGTG TCGATGCCAA GTTCTTTACA
GGGTTTCTAA CGGCAGTCGC TGCATTAAAT ATATCACTCA TCGCAATCTT CGCCTGGGGA
CGGCTGCTAA AGCCAGTGTT GATTTTTTCG ATACTTACAG CGTCTATCAC AAGCTACTTC
ATGCTGAACT ACGGGATAGT CATTGATCCC GGCATGGTGA GGAACACAAT ACAAACGGAT
GTGGCTGAGG CGAGCGATCT CGTAAGCGTA CAAATGCTGC TTACCGTAGT TATGCTTTCT
GCAGTACCGA TCGCGTTCAT ATGTCTTGCG AATGTAAAGA AGACTACTGC AGTTGGGTCG
TTAGCCACCT CCATTGCTTT GTCAGCAACG GGCTTAGTAT TTTCAATTTT GTGCATATTT
TTAATTTATC AGCCATTCTC CTCGACGATG AGAAATCATA CAAAGATGAG ATATCTGATA
AACCCACTAA ATACCTTTTA CTCAACAATT AAGGTTGCCA CAAATCCATT AGAACGGACA
AATGCTGAGC TTTCTAAAAT AGGCCAAGAC GCCAAAATAA TTACACCCCC TGCAGAAACT
ACAGCCGCGC CCATCCTACT ACTAGTAGTC GGTGAAACTG CACGATCAGA AAGCTTTGGA
TTAAACGGGT ACGAAAGGAA TACAACTCCG CAGTTGTCCC AACGTACAGA TATCTTCTCA
TCGAAAAATG CTTGGTCTTG CGGGACGAGT ACAGCTGAGT CGCTTCCCTG CATGTTCTCT
CACATGAGTA GAGAAAAATA TTTCTCCAGA AAGCAAAATT ACGAAAACAT GCTCGATGTC
TTGAGTCGCG CCGGGCTATC CGTCTTCTGG CTCGACAACC AGTCCGGGTG CAAGGGCATT
TGCGCAAGGG TCGCAAACGA ACAATTCAAG CATCAACCAA ACAACCCTCT ATGTGACAAA
GAAGGTGTTT GCCAAGATGC AGCCATGCTG GACTCTCTTG AAGAGCGTAT TAAATGGCCT
CCAACAAATA CAGGAGATAA AGGCAAGGTG ATCGTGCTTC ACCAGATGGG TAGCCATGGA
CCCGCCTATT ACAAGAGATC AAGCATGCAG AGAAAGCCTT TCCAGCCCGA ATGCAAATCA
GCATCTCTGC AGCAATGTAC ACAGCAAGAG GTTATAAACG CCTACGACAA CAGTATTGTC
GAAACGGATC ACTTCATAAA TAGCTCTATC GAGTGGCTGA AAAACAAATT CCCATCAACC
CCCACTGCAT TGATTTACGT CTCTGACCAT GGAGAATCAC TGGGTGAAAA TAACATATAT
CTTCACGGCC TCCCATACTC AATAGCGCCC AACGTACAGA AAAATATACC GTGGATAGTT
TGGCTCTCCG AATCCATGAT GGCATCCAGA CAAAAAAACC TATCCTGCAT TGCAGAGAAA
AACAACGACA GAGCCATTAG TCATGATAAC TACTTTCATA CTGTACTTGG ATTAATGAAC
GTTCAAACAG CTGTTTATGA GAAATCTCTA GACATCACTG CACCATGCAT GAAGAAAGAG
TCGGTCGCCA ACATAACAAA TATGTAA
 
Protein sequence
MPSSLEQRSL EEGFLRLAQA KELVMKNNNQ SFLQKISAHL TVGPALLIIA TGLWIATIGN 
IPLWKALSQL PEGVDAKFFT GFLTAVAALN ISLIAIFAWG RLLKPVLIFS ILTASITSYF
MLNYGIVIDP GMVRNTIQTD VAEASDLVSV QMLLTVVMLS AVPIAFICLA NVKKTTAVGS
LATSIALSAT GLVFSILCIF LIYQPFSSTM RNHTKMRYLI NPLNTFYSTI KVATNPLERT
NAELSKIGQD AKIITPPAET TAAPILLLVV GETARSESFG LNGYERNTTP QLSQRTDIFS
SKNAWSCGTS TAESLPCMFS HMSREKYFSR KQNYENMLDV LSRAGLSVFW LDNQSGCKGI
CARVANEQFK HQPNNPLCDK EGVCQDAAML DSLEERIKWP PTNTGDKGKV IVLHQMGSHG
PAYYKRSSMQ RKPFQPECKS ASLQQCTQQE VINAYDNSIV ETDHFINSSI EWLKNKFPST
PTALIYVSDH GESLGENNIY LHGLPYSIAP NVQKNIPWIV WLSESMMASR QKNLSCIAEK
NNDRAISHDN YFHTVLGLMN VQTAVYEKSL DITAPCMKKE SVANITNM