| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1716 |
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| Symbol | |
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| ID | 5747274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1908844 |
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| End bp | 1912032 |
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| Gene Length | 3189 bp |
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| Protein Length | 1062 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641296797 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001562744 |
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| Protein GI | 160897162 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.735829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAAC GCATCATCCG CTTTGCCATT GAGCAGCGCT GGCTTGTGCT GCTCGCCGTT
TTCGGCATGG CAGCACTGGG CATCTTTAGC TACCAGCGCC TGGCCATCGA CGCTGTGCCC
GACATCACCA ATGTCCAGGT GCAGATCAAC ACCCAGGCTC CCGGCTACTC TCCGCTGGAG
ACTGAGCAGC GCGTCACCTA CCCGATAGAA ACGGTGATGG CTGGACTGCC GAACCTGGAG
CAGACGCGCT CGCTGTCGCG CTACGGCCTG TCTCAGGTTA CCGTAGTGTT CAAGGACGGC
ACGGACATCT ACTTCGCGCG CCAGCTCGTG GGCGAACGCA TGCAACAGGC CCGAGAGAGC
CTGCCAGACG GCGTGTCTCC CACCTTAGGG CCGATATCGA CTGGCCTAGG AGAGATCTAT
CTCTGGACCG TTGAGGCGGA GGAAAACGCC AAAAAGCCCG ATGGGTCTCC CTACACTCCT
ATGGACTTGC GGGAGATCCA GGATTGGGTG ATCAAACCTC AGCTGCGCAA CGTGCCAGGC
GTTACTGAGA TCAACTCAAT TGGTGGCTAC GCGAAGGAGT ACCTCGTCGC GCCCTCTCCT
GAGAAGCTCT CTGCCTACGG CTTCACACTG GCCGACATCG TGGCGGCGCT GCAGCGCAAC
AATGCAAACG TCGGCGCTGG CTACATCGAG CGCCAAGGCG AGCAATATTT GATCCGTGCG
CCTGGTCAAG TTAAGGGCAT CGCAGACATC CGTGAGGTCA TCGTTGGCTC TGCACAGGGT
CAGCCTATTC GCATCCGTGA CTTGGCAGAA GTGGGCCTCG GCCGCGAGCT GCGCACTGGC
GCAGCCACCG ACAACGGTCG CGAGGTAGTG CTGGGAACGG TGTTCATGCT GATTGGAGAG
AACAGCCGAA AGGTTTCCCA GGCCGTCGAT ATTCGTATGC GGGAAATTAA CCGCAACTTG
CCCGAAGGCG TCAAAGCCGT AACGGTCTAC GACCGTACGA ACCTGGTGGA CAAGGCCATT
GCCACCGTCA AAAAGAACTT GCTCGAAGGC GCCGCCCTGG TGGTGGTCAT CCTCTTCCTG
TTCCTGGGTA ACCTGCGCGC GGCGCTGATC ACAGCGTTGA TCATCCCACT GTCCATGTTG
TTCACCTTCA CCGGAATGGT GTACTACAAA GTCAGTGCCA ACCTCATGAG CTTGGGAGCT
CTCGACTTCG GCATCATCAT CGATGGCGCC GTGGTGATCG TGGAAAACTG TGTACGCCGT
TTGGCCCATG CGCAAGAAGC GCGCGGCCGC CCCTTGACTC GCAGTGAGCG GTTTCATGAA
GTGTTTGCTG CCGCCAAGGA AGCTCGGCGT CCGTTGCTCT TCGGCCAGCT CATCATCATG
GTGGTCTATC TGCCCATCTT TGCCCTCACA GGGGTGGAAG GCAAGATGTT CCATCCCATG
GCGTTGACTG TGGTCATTGC CTTGGCCGGC GCCATGCTGC TGTCCATCAC GTTCATTCCT
GCGGCTGTGG CCCTGTTCAT GGGCGACAAA GTGGCCGAAA AGGAAAACCG CATCATGGGC
TGGGCTCGGC AGGCGTACTC GCCTGTGCTT GCCCGCGTTA TGGCGGCTCC AGCAGTGGTG
TTGACAGCAG CAGGCGTGGC GGTCGCGCTC AGCCTTCTGC TTGCGACGCG CCTTGGTAGC
GAGTTCGCTC CTAATCTCAA CGAGGGTGAT TTCGCCATAC AGGCGCTGCG CATACCAGGC
ACCAGCCTCA CGCAGTCCTT GGAGATGCAG ATCCAGATCG AAAATACTCT GAAAAAGGAG
TTCCCCGAGA TCGATCGAGT GTTCGCTCGT ACAGGTACTG CCGAGATCGC TTCGGATCCG
ATGCCTCCCA ACATCTCCGA CGGCTACATC ATGCTCAAGC CCAAGGACCA GTGGCCAGAT
CCATCTCGTT CACGCGATGA CCTGCTCGCT GCCATCCAGA AGACTGCTGA CGGAGTGCCA
GGCAACAACT ATGAGTTTTC GCAGCCGATT CAGCTTCGCT TCAACGAACT GATCTCGGGC
GTGCGCAGCG ACGTCGCCGT CAAGATCTTT GGTGACGACA TGGCCGTCCT GGAGAAGAAC
GCCCAAACAG TGGCAGGGAT GCTTCAGCAG ATCCAAGGCG CCTCTGAGGT TAAGGTTGAA
CAGACGACAG GCCTGCCCAT GCTCACCGTT CAAATTGACC GTGAGAAGGC TTCACGCTAT
GGGCTGAACA TGGGTGACGT ACAGGACACC ATCAGCGTTG CGTTGGGCGG AGGAGAAGCG
GGGATCGTGT TCGAAGGCGA TAAGCGCTTC GACATTCAAG TGCGCCTGCC GGAGAACATC
CGCAATGACG TGGAAGCGCT GAGCCGCCTT CCCATCGCCT TGCCAAAGGG AGCAGATGGC
CGAGTTGGCT TCGTCCCTTT GTCTTCCGTT GCGACCTTTG AGACGGCGCC TGGTCCCAAC
CAAGTCAGCC GAGAGGATGG GAAACGACGC ATCGTCGTCA GCGCAAACGT GCGCGGACGT
GACATCGGGT CCTTTGTGGG CGAAGCAGAG CAGCGCCTGG AGAGCTTGCA ACTGCCGGCT
GGCTACTGGA CCCGTTGGGG AGGTACGTTT GAGAACCTGG AGTCCGCTCG ACAGAGACTT
CTGATCGTCG TACCCGTTGC ACTTTTGATG GTGTTCGTGC TGCTCTTCGC AATGTTCGGC
AACGTTCGTG ACGGCCTCAT CGTCTTCACG GGTATTCCGT TTGCGCTAAC GGGAGGCATC
TTGGCGCTAT GGCTGCGCGA CATCCCGTTG TCGATTACGG CAGCTGTGGG TTTTATCGCG
CTATCCGGTG TGGCAGTGCT CAACGGCCTG GTGATGATCT CCTACTTCCG TACATTGCGT
GAAGAGGGTC GAAACGTAGC TGACGCCGTG ACTGAGGGAG CCCTGACCCG GCTGCGGCCG
GTCTTGATGA CCGCCCTGGT CGCCTCACTT GGGTTCGTCC CCATGGCCAT CGCCACGGGT
ACTGGAGCTG AAGTGCAGCG TCCCCTGGCC ACCGTGGTGA TCGGAGGGAT TCTGTCCTCA
ACGATCCTCA CGCTCTTAGT GCTGCCTTTG CTGTACCGAC TCATACACAG GAACGACCCT
TCAGAAAGTG AAGGTCAAGG GAACCCCGAG AGTGGAGCAT CGTCCTCTGG CGAGGTGGCG
ATCGTGTAA
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| Protein sequence | MFERIIRFAI EQRWLVLLAV FGMAALGIFS YQRLAIDAVP DITNVQVQIN TQAPGYSPLE
TEQRVTYPIE TVMAGLPNLE QTRSLSRYGL SQVTVVFKDG TDIYFARQLV GERMQQARES
LPDGVSPTLG PISTGLGEIY LWTVEAEENA KKPDGSPYTP MDLREIQDWV IKPQLRNVPG
VTEINSIGGY AKEYLVAPSP EKLSAYGFTL ADIVAALQRN NANVGAGYIE RQGEQYLIRA
PGQVKGIADI REVIVGSAQG QPIRIRDLAE VGLGRELRTG AATDNGREVV LGTVFMLIGE
NSRKVSQAVD IRMREINRNL PEGVKAVTVY DRTNLVDKAI ATVKKNLLEG AALVVVILFL
FLGNLRAALI TALIIPLSML FTFTGMVYYK VSANLMSLGA LDFGIIIDGA VVIVENCVRR
LAHAQEARGR PLTRSERFHE VFAAAKEARR PLLFGQLIIM VVYLPIFALT GVEGKMFHPM
ALTVVIALAG AMLLSITFIP AAVALFMGDK VAEKENRIMG WARQAYSPVL ARVMAAPAVV
LTAAGVAVAL SLLLATRLGS EFAPNLNEGD FAIQALRIPG TSLTQSLEMQ IQIENTLKKE
FPEIDRVFAR TGTAEIASDP MPPNISDGYI MLKPKDQWPD PSRSRDDLLA AIQKTADGVP
GNNYEFSQPI QLRFNELISG VRSDVAVKIF GDDMAVLEKN AQTVAGMLQQ IQGASEVKVE
QTTGLPMLTV QIDREKASRY GLNMGDVQDT ISVALGGGEA GIVFEGDKRF DIQVRLPENI
RNDVEALSRL PIALPKGADG RVGFVPLSSV ATFETAPGPN QVSREDGKRR IVVSANVRGR
DIGSFVGEAE QRLESLQLPA GYWTRWGGTF ENLESARQRL LIVVPVALLM VFVLLFAMFG
NVRDGLIVFT GIPFALTGGI LALWLRDIPL SITAAVGFIA LSGVAVLNGL VMISYFRTLR
EEGRNVADAV TEGALTRLRP VLMTALVASL GFVPMAIATG TGAEVQRPLA TVVIGGILSS
TILTLLVLPL LYRLIHRNDP SESEGQGNPE SGASSSGEVA IV
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