| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1684 |
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| Symbol | |
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| ID | 5747242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1873327 |
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| End bp | 1874904 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641296765 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_001562712 |
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| Protein GI | 160897130 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGAA ACGTGTACGT CACCCAGCGT GAGTACCCTC TGAGCGAAGG AGAGACGCTT
CTTTCCGTCA CCGACCTGAA GGGGCGCATC GTCTATGCCA ACGATGCCTT CATCCGCGTC
AGCGGCTTCG AGGCCGCCGA GCTCTACGGC AAGGCCCACA GCATCGTGCG CCATCCCGAC
ATGCCGGCCG CCGCCTTTGC CGACATGTGG TCCACCATCC AGCGCGGGCT GCCCTGGAGC
GCCCTGGTCA AGAACCGGCG CAAGAACGGC GACCACTACT GGGTGCGCGC CAACGCCAGT
CCCATACGCC ATGCGGGCGC CGTGGTCGGC TACCTGTCCG TGCGCACCCG GCCCGAGCCG
TGCGAGGTGC AGCAGCATGC GGCGCTCTAT GAGCAGATCA ATGCCGGTGT GCGCTCGCTT
GGCCTGCACC GGGGCTTTCC CGTGGGGCGC GGCGCCGTGG GCGCGCTGCA GCGGTGGTGG
CGCTTTCGGC CACTGGCCTG GCGCGTGCAG GCCGTGGTGG CCGGCCTGTG GCTGCTGGGG
TCGGCCGGGC TGTGGTCTTC CGTGCTGCAG GCATCGGCCG TGCCGCTGGC CCAGGTCTGG
CCGGCCTGGC TGATCTGGAG CCTGGCCTGC GTGGCGGCCG GGCAGTGGCT GCGCAGCCGG
CTGCTCATGC CCCTGGCGGC GCTGCGTGGC CAGGCACAGG CCGTGGCCAG CGGGCAGCAG
ACCGATGCAC GGTTCCTGCA GCGCACGGAC GAGATCGGTG CCATCGGCAG CGCCGTGCGG
CAGACCGGGC TCAACCTGGT CTCCCTGGTC GGCGACATCC AGGGCAAGAG CGACCAGGTG
CGCCGCTGCG CGCTGGCCGT GCAGCAGGGC AGCACCGAAC TGAGCGATCG CACCGAAGCC
GCGGCCGCGA GCCTGGAGCA GTCGGCCCAG GCCATGCAGG CCCTGGCCAG CGCCATCGAG
CGCAGCAGCG CCCAAGCCGG CGAGGCCGCC GCCCGCGCGC GGCACGGCGT GGACATGGCA
GGGCAGAGCA GCCGCATGGT CGTGCAACTG GACCAGGGCA TGCGCGGCGT GGCCCAGACC
AGCGACCAGG TGGGGCAGAT CAGCTCGCTC ATCGACGGCA TCGCCTTCCA GACCAACCTG
CTGGCGCTCA ACGCCGCCGT GGAGGCGGCA CGCGCGGGGG AACACGGCAA GGGCTTTGCC
GTGGTGGCCG ACGAGGTGCG CGGCCTGTCC CAGCGCAGCG CCCGCGCCGC GCGCCAGATC
AAGGCGTTGA TCGAGGCATC GCAGCAGCAG GTGGCGCAAA GCTGCGCCAT GGCGCGTGAA
GTGGGCGAGG CCATGCTGGC CGTGCAGGCC GATATGCGCG AGCAACTGGT GCTGGCCGAA
GGCATGCAGG CCGCCAGCCA GGCCCAGGCC GGCGGCGTGC AGCAGGTGCA GGCCGCCGTG
CAGCAGCTCG AACAGATGAC CCAGCACAAT GCCGCCCTGG CGCGCGACAC CATCGGGCAC
GCACAGCTGC TGGCCGGACA GGCGCAGGCG CTGGAGGCTG CGGCATCGGT CTTTCACGGC
AGCGGGGCGT CCGCATGA
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| Protein sequence | MRRNVYVTQR EYPLSEGETL LSVTDLKGRI VYANDAFIRV SGFEAAELYG KAHSIVRHPD
MPAAAFADMW STIQRGLPWS ALVKNRRKNG DHYWVRANAS PIRHAGAVVG YLSVRTRPEP
CEVQQHAALY EQINAGVRSL GLHRGFPVGR GAVGALQRWW RFRPLAWRVQ AVVAGLWLLG
SAGLWSSVLQ ASAVPLAQVW PAWLIWSLAC VAAGQWLRSR LLMPLAALRG QAQAVASGQQ
TDARFLQRTD EIGAIGSAVR QTGLNLVSLV GDIQGKSDQV RRCALAVQQG STELSDRTEA
AAASLEQSAQ AMQALASAIE RSSAQAGEAA ARARHGVDMA GQSSRMVVQL DQGMRGVAQT
SDQVGQISSL IDGIAFQTNL LALNAAVEAA RAGEHGKGFA VVADEVRGLS QRSARAARQI
KALIEASQQQ VAQSCAMARE VGEAMLAVQA DMREQLVLAE GMQAASQAQA GGVQQVQAAV
QQLEQMTQHN AALARDTIGH AQLLAGQAQA LEAAASVFHG SGASA
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