Gene Daci_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1620 
Symbol 
ID5747177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1816275 
End bp1816529 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content59% 
IMG OID641296701 
ProductXRE family transcriptional regulator 
Protein accessionYP_001562649 
Protein GI160897067 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0346957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAACC TCAAGCGCAT CCGCGAGCGT CTTGGTGTGA CCCAAAAGGT GCTTGCTGCC 
GGCCTGGGTT GCTGCCAAGC GAACGTTTCC AACATCGAGT CGGGTCAGAC AACGCTCCTT
CCCGAGACAG CCCGGAAACT CATCGAATTC TCCGAGTCGA GAGGGCTGCC CATCGACTTC
GCCCATGTCT ATGGGCCATC AGACGTGCCG CTGCCCGATC TGGTGCAGCC AGCCGTATCT
CTCAAGGAAG TCTGA
 
Protein sequence
MHNLKRIRER LGVTQKVLAA GLGCCQANVS NIESGQTTLL PETARKLIEF SESRGLPIDF 
AHVYGPSDVP LPDLVQPAVS LKEV