Gene Daci_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1613 
Symbol 
ID5747170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1809978 
End bp1810997 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content66% 
IMG OID641296694 
Producthypothetical protein 
Protein accessionYP_001562642 
Protein GI160897060 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0414314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCG CGTGCGCGCC TCAGTCTGCT GGCCCTTCCC TGTGGTCGTC GGCCACATCC 
CCAACACCCC CACGCGCCCA GCACCGCTGC GCGCTCGATA GGAACACCAT GACCAACTCC
GTACGCAAGA TGCTCGAATC GAAAGAGGCA AAGCGGGCAG ACGCCGTGCA TGTGCGGTAT
GAGAGCCTGC ATGTCGAACC CGGCTTCAAC CTGCGCCAGC AGGACCAGGA CCTGGAAGAG
AGCATCGAGG CCCTGGCCCT TCACATCATC GATGGTGGGA AGTATCCGCC CCTTGAGGTG
CGGCCCCGTG ACGACGGCGG CATGTGGATC GTGGACGGCC ATCGCCGGCA TGCCGCCATC
GGCCGCGCCC TGGCCCGCAA CGCCCCGTTG CGTAGCCCCA AGGATGGCGA GGCCTGGATC
CACGTCGTAC TCTTCGAGGG CAACGAAGAG GACCGGATCG CGCGCATCAT CACCAGCGCC
AACAACAAGC CACTGACGCC GGCCGAGATC GCCGAGGGGT ACAAGCGGCT GAAGGCCTTT
GGCTGGACGC CCGCGCAGAT AGCCAAAAAG GTCGGCCGCT CCGCGCAGCA TGTGCAGGAT
CTGCTGGCCC TGGGCAACGC GCCGAGCCCG GTGCGCGAAA TGGTGAAGGC TGGCCAGGTG
TCGGCCACCC GCGCCGCCAA AGCCGCACGC AAGCATGGCG ACAAGGCCAC GGCAGTGCTG
GGCGAGCAGC TGCAGCAGGC CCAGGCCAAG GGCAAGAAGC GGATCACGGC GGCCACGGCC
GAGGCCCGCA AACCCACCCC CGTTGATGCT GATGGAGAGC GCTACCGCTG GCTGTTCGGC
GCCCGCACGG CCGAAGAACT GGAGGCAATG ACTGCGGATT CCGGGCCGCC ACTGGACAAA
CCGCAGGACG TGGTCATGTG CGAACTGATG ACCAACTACA TCACCAAGGC CTACGCGGAT
GAAATGATCG ACGCCGCCCG CGCAGCCCAA GCGGCAATCA AGAGCGGGGA CGCACCATGA
 
Protein sequence
MPSACAPQSA GPSLWSSATS PTPPRAQHRC ALDRNTMTNS VRKMLESKEA KRADAVHVRY 
ESLHVEPGFN LRQQDQDLEE SIEALALHII DGGKYPPLEV RPRDDGGMWI VDGHRRHAAI
GRALARNAPL RSPKDGEAWI HVVLFEGNEE DRIARIITSA NNKPLTPAEI AEGYKRLKAF
GWTPAQIAKK VGRSAQHVQD LLALGNAPSP VREMVKAGQV SATRAAKAAR KHGDKATAVL
GEQLQQAQAK GKKRITAATA EARKPTPVDA DGERYRWLFG ARTAEELEAM TADSGPPLDK
PQDVVMCELM TNYITKAYAD EMIDAARAAQ AAIKSGDAP