| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1598 |
|---|
| Symbol | |
|---|
| ID | 5747155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1794671 |
|---|
| End bp | 1796134 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641296679 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001562627 |
|---|
| Protein GI | 160897045 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCGC CGGCTTCCTC CCTTGTTTCC TCCCTTGTCG CCCGGGCGCG CAGCCGCCTG
CCCGGTGCAC TGGGCACGCG GCTGCTCCTG TTCCTGGGCG CGGCCATCGT GCTCACGGCG
CTGCTGCAGG GCCTGCTGGC CTACCGCAAT GCGCTGCTGC AGACCGACAC CCTGTTCGAC
TACCAGATGC AGCAGACCGC CTTTGCGCTG CGCGCCGGCC TGCCGGTGGA TGCGCGCGGC
AGGCCTCAGG GCACGCCGCC CGAGGATGAG AACCACGAAT TTATCGTCCA GGTCTGGACC
AACGAAGGCC TGCGCATTTT CGAATCCGCG CTGGGTGCGG CATTGCCGCA GATGGCCGTG
CTGGGCTTTG CCGATGTGCC CGCGCGCGGC ACCGTCTACC GCGTGTTCTC GCTGCAGACG
CGCTCGCAGG TGATCCAGGT GGCGCAGGAC ATGCGCGTGC GCCGCACCCT GGCGCGCGAC
GCCGCCTGGC AAAGCCTGCT GCCCATTGCC CTGCTGGCGC CCGTGCTGGC GCTGGCCGTG
TGGTGGGTGG TGCGCAGTTC GCTGGCGCCC GTGCAGCGCG TGCGCCGCGA ACTGGCCACG
CGCCGCCCGC AGGACCTGGC CCCCGTGCCT GCCGAGGGCC TGCCCGACGA GGTGCGGCCC
CTGGTGGCCG AGCTCAACGC GCTGCTGCAG CGCGTGGGCC AGGCCTTTGA GGCGCAGCAG
CACTTCGTGG CCGATGCCGC GCACGAGCTG CGCTCTCCGC TGGCCGCGCT CAAGCTGCAA
CTGGTGGCCT TGCAGCGGGC GCCCGATGTG GCCGCGCATG ACGAGGCCGT GCAGCGTCTT
TCGGCCGGCA TAGACCGGGC CACACGGCTC GTCGAACAAT TGTTGACATT GGCGCGGCAG
GAAGCCCAAG GCACGGTACA AGGCACGGCC CCAGGCCTGC AGGGCATGCA GGGCCAGCAC
GGCGCTGCCG CGGCCGCACC TGCCGACGTG GACCTGCGCG AGGTGGTGGA GCAGGCCCTG
GCAGACCAGG CCGTGGCCGC CCAGCAGCAT GGCCTGGACA TGGGCCTGAG CGAGTCCCCG
CAACTGCGGC AGTCCTTTGC CGTGGCGGGC GACGCACAGT CCTTGCAGAT GCTGGTGCGC
AACCTGCTGG ACAACGCCGT CAAGTACGTT CCGCAAGGCG GCCGCGTCGA TGTCGGCTGG
CGCAGCGATG CACAGGGCCG CGCCCTGGTG GTCGAGGACT CGGGCCCCGG CATTGCCGAA
AGCGAGCGCG AACTGGTGCT GCGGCGCTTT GTGCGTGGGC CTTCAGCGAC TTCTGCGGGC
CAGCAGGCGC AGGGCAGCGG CCTGGGCCTG GCCATCGTGC AGACCATTGC CGAGCGGCAT
GGCGCACGCC TGCTGCTGGA CTGCTCGCCC ACGCTGGGCG GCCTGCGCGT GCAGGTGATG
TGGCCGCCTG TGTCGGGCCG CTGA
|
|---|
| Protein sequence | MKAPASSLVS SLVARARSRL PGALGTRLLL FLGAAIVLTA LLQGLLAYRN ALLQTDTLFD
YQMQQTAFAL RAGLPVDARG RPQGTPPEDE NHEFIVQVWT NEGLRIFESA LGAALPQMAV
LGFADVPARG TVYRVFSLQT RSQVIQVAQD MRVRRTLARD AAWQSLLPIA LLAPVLALAV
WWVVRSSLAP VQRVRRELAT RRPQDLAPVP AEGLPDEVRP LVAELNALLQ RVGQAFEAQQ
HFVADAAHEL RSPLAALKLQ LVALQRAPDV AAHDEAVQRL SAGIDRATRL VEQLLTLARQ
EAQGTVQGTA PGLQGMQGQH GAAAAAPADV DLREVVEQAL ADQAVAAQQH GLDMGLSESP
QLRQSFAVAG DAQSLQMLVR NLLDNAVKYV PQGGRVDVGW RSDAQGRALV VEDSGPGIAE
SERELVLRRF VRGPSATSAG QQAQGSGLGL AIVQTIAERH GARLLLDCSP TLGGLRVQVM
WPPVSGR
|
|---|
| |