| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1594 |
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| Symbol | |
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| ID | 5747151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1790104 |
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| End bp | 1791666 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641296675 |
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| Product | protease Do |
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| Protein accession | YP_001562623 |
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| Protein GI | 160897041 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGA TTCTGTCCAC TCCCCGCCGT CTGGTGCTGG CCCTGGTGGC CGCAGGTGCC
ATCGGCGCCC TGGGCGCCAC GGGCGCCGGT CTGGTTGGTG TGGTGCATGG CGATGCGCGT
GCCGCCACGT CGCTGTTTGC GCCTGCAGCA CAGCCTGCTT CTACCGCTTC TCCAGCTTCC
CCCGCCGCCG CCGTGGCGGC GCCCAACTTT GCCGACATCA CGGCGCGCAA CGGCGCGGCC
GTGGTCAACA TCAGCGTGGT CGGCAGCTCG CGCGCCATGG GCGAGGATGG CGACGAGGCC
GCTGCACGGC AGGGCCAGGG CCAAGGTCAG GGCCTGCAGG GCATGGACCC CAACGATCCG
TTCTTTGAAT TCTTCCGCCG CTTCGGCGTG CCCGGCATGC CGGGCATGGG CCAGGGCCAG
CCGCAGCGCG ATGTGCCCAC GCGCGGCGAA GGCTCGGGCT TCATCGTCTC CAGCGACGGC
CTGATCCTGA CCAATGCCCA CGTGGTGCGC GGCGCCAAGG AAGTCACTGT CAAGCTGACC
GACCGGCGTG AGTTCAGCGC CAAGGTGCTG GGCGCCGATC CCAAGACCGA CGTGGCCGTG
CTGCGCATCG AGGCGAAGAA CCTGCCCACC GTCTCGCTGG GCAAGACGGC CGATCTGCGC
GTGGGCGACT GGGTGCTGGC CATCGGCTCG CCCTTCGGTT TCGAGAGCAG CGTGACGGCC
GGCGTGGTCA GCGCCAAGGG CCGCACCCTG CCTGACGACT CCTTCGTGCC CTTCCTGCAG
ACCGACGTGG CCATCAACCC CGGCAACTCG GGCGGCCCGC TGTTCAATGC GCGCGGCGAG
GTGGTGGGCA TCAACAGCCA GATCTACTCG CGCTCGGGCG GCTACCAGGG CGTGTCCTTC
GCCATTCCCA TCGAGGTGGC CACGCGCGTG CAGCAGCAGA TCGTGGCCAC GGGCAAGGTG
CAGCATGCGC GGCTGGGCGT GGCCGTGCAG GAGGTGAACC AGGCCTTTGC CGACTCCTTC
AAGCTCGACC GTCCCGAAGG CGCCCTGGTG TCCAGCGTGG ACAAGAGCGG CCCTGCCGCC
AAGGCAGGCC TGGAGCCCGG CGACGTGGTG CGCAAGATCG ATGGCCAGCC CATCGTGGGA
TCGGGCGATC TGCCGGCCTT TGTGGGCCAG GCGCTGCCGG GCCAGAAGGT CACGCTGGAG
ATATGGCGCA ACGGCGAGGC CCGTACCCTG AATGCCGTGC TGGGCGATGC CAGCGACAAG
GCCGCCAAGG TGGCCAAGGA CAAGCCCGAC GCCGGCAAGG GCAAGCTGGG CCTGGCCCTG
CGCCCGCTGC AGCCCGAGGA AAAGCAGCAG ATCGGCGTGA AGGACGGCCT GGTTGTGGCC
GACGCCGCGG GCCCGGCCGC CGAGGCCGGC ATCACCCAGG GCGATGTGCT GCTGTCCATC
AATGGCACGC CTGCCGGTGA TGTCGAGGCC GTGCGCGCCG CCATGGCCAA GGCCGGCAAG
ACCGTGGCCG TGCTGATCTG GCGCGATGGC AACAGGATCT TTGTCCCCGT ACGTCTCGGG
TAA
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| Protein sequence | MNKILSTPRR LVLALVAAGA IGALGATGAG LVGVVHGDAR AATSLFAPAA QPASTASPAS
PAAAVAAPNF ADITARNGAA VVNISVVGSS RAMGEDGDEA AARQGQGQGQ GLQGMDPNDP
FFEFFRRFGV PGMPGMGQGQ PQRDVPTRGE GSGFIVSSDG LILTNAHVVR GAKEVTVKLT
DRREFSAKVL GADPKTDVAV LRIEAKNLPT VSLGKTADLR VGDWVLAIGS PFGFESSVTA
GVVSAKGRTL PDDSFVPFLQ TDVAINPGNS GGPLFNARGE VVGINSQIYS RSGGYQGVSF
AIPIEVATRV QQQIVATGKV QHARLGVAVQ EVNQAFADSF KLDRPEGALV SSVDKSGPAA
KAGLEPGDVV RKIDGQPIVG SGDLPAFVGQ ALPGQKVTLE IWRNGEARTL NAVLGDASDK
AAKVAKDKPD AGKGKLGLAL RPLQPEEKQQ IGVKDGLVVA DAAGPAAEAG ITQGDVLLSI
NGTPAGDVEA VRAAMAKAGK TVAVLIWRDG NRIFVPVRLG
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