Gene Daci_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1574 
Symbol 
ID5747131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1763957 
End bp1764484 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content69% 
IMG OID641296655 
ProductCheW protein 
Protein accessionYP_001562603 
Protein GI160897021 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.10393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACC GTGAAGCACT GCGCGATCTG CAATCCCGTC TGGCCGGCCG TCTCCAGGCC 
GCACGCAGCG AAGGCGTCAA GGTGGCGGCC TGGCTGGCCG TCCAGGCCGG CGGGCGCAAC
TACCTGATGC CGCTGGGCCA GTCCGGCGAG ATCTTTCCCT GGGCCGGCGT ACAGCCCGTG
CCCTATACAA AGCCCTGGTT CCTGGGCATT GCCAACCTGC GCGGCACCCT GGCCGGGGTG
ATCGACCTGG CCAGCCTGCT GGGCCATGGC GTGGCGCGCA GCGAACCGGC GCTGGCCGAG
TCCAGCCTGC TGGCCTTCAA TGCCGCGCTG GAAGTGAACG CCTCCCTGCT GGTGGACCGC
CTGCAGGGCC TGCGCAGCGC CGACGCCTTT GTGCGCACCG AGCCCGCGCC CGAGCAATCC
CCCGCCTTTT TCGGCCCCGT GCATATCGAT GAAGCGGGCC ACCGCTGGCA GGAGCTGCAA
TTGCAGCGCC TGTCCCAAAC CTCCGAGTTT CTGAGCATTC GCGCCTGA
 
Protein sequence
MANREALRDL QSRLAGRLQA ARSEGVKVAA WLAVQAGGRN YLMPLGQSGE IFPWAGVQPV 
PYTKPWFLGI ANLRGTLAGV IDLASLLGHG VARSEPALAE SSLLAFNAAL EVNASLLVDR
LQGLRSADAF VRTEPAPEQS PAFFGPVHID EAGHRWQELQ LQRLSQTSEF LSIRA