Gene Daci_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1493 
Symbol 
ID5747049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1672311 
End bp1672883 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content65% 
IMG OID641296573 
Productredoxin domain-containing protein 
Protein accessionYP_001562522 
Protein GI160896940 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGGA GGCCGACCGT GGCTGATTCA GTGGATGCAG GGCAAAACAC ATCTTCCCGC 
CGCCGTTGGC TGATGGGCGG CGTTGCCGCC GCCGCGGGCC TGGGTGGGGC AGGTTTTGCG
TGGTGGCGTT TTCAGCCGCA CGCCATGGAT GCCAGTGCCG AAGAGCAGCT GTGGCAGCAG
CGCTTCATCA CGCCCGATGG CTCGGCCATG ACGCTGTCGC GCTGGCGCGG CAAGCCGGTG
CTGGTCAATT TCTGGGCCAC CTGGTGCCCG CCCTGCGTGC GCGAGCTGCC CATGCTCGAT
GCCTTCTCGG CGCGCCAAAA CCAACATGGT ATTCAGGTCA TTGGCCTGGC CGTGGACAAG
CCGGAGGCCG TGCAGCGCTT CCTGGGTCGC ACACCCCTGC GTTTCCCTGT GGCGCTGGCG
GTGGAAGGCG GTCTGGGCCT GACCCGCTCG CTGGGCAATC TGCAGGGCGG ACTGCCCTTC
ACCGTGCTGC TCGGCGAAGA TGGCATGGTG CAGCAACGTA AAATAGGTGA GCTTACTACC
GAAGATCTGG CTTCCTGGAG CGCAAAAGGC TGA
 
Protein sequence
MKRRPTVADS VDAGQNTSSR RRWLMGGVAA AAGLGGAGFA WWRFQPHAMD ASAEEQLWQQ 
RFITPDGSAM TLSRWRGKPV LVNFWATWCP PCVRELPMLD AFSARQNQHG IQVIGLAVDK
PEAVQRFLGR TPLRFPVALA VEGGLGLTRS LGNLQGGLPF TVLLGEDGMV QQRKIGELTT
EDLASWSAKG