| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1476 |
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| Symbol | lpxC |
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| ID | 5747032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1653926 |
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| End bp | 1654849 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641296556 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001562505 |
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| Protein GI | 160896923 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.881952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCAAC AACGCACCAT CAAGACGATC ACCCGTGCCG TTGGCGTGGG CCTGCACAGC
GGCCAGCGCG TCGAGTTGAC GCTGCGACCC GCGCAGCCCG ACACCGGCAT CGTGTTCCGT
CGCGTGGACC TGCCGGAGCC TGTGGACATC CCGATCTCGG CCGAAGCCGT CACCGACACG
CGCATGGCCT CCACCATCGG CACCGGCGGC GCCAAGGTGC ATACCGTGGA GCACCTGATG
TCGGCCATTG CCGGCCTCGG GCTCGACAAC ATCTATATAG ACATCACCGC CGAGGAAGTG
CCCATCCTCG ACGGCTCCTC CGCCTCCTTC GTGTTCCTGC TGCAAAGCGC GGGCATCGAG
TTGCAGAAGG CTCCCAAGCG CTTCATCCGG GTCATCCGCC CCGTCGAGGT GCGCGAGGGC
GAGGGCCAGA ACCTCAAGTG GGCACGCTTC GACCCCTACC ACGGCTTCAA GCTGCGCTTC
GAGATCGACT TTGCCCATCC GGCCGTAGAC TCCACGGGCC AGTGTGTGGA GTTCGACATG
GGTGAGGACA ACTACACGCG CGACATCGCA CGCGCGCGCA CCTTCGGCTT CACCAAGGAC
GTGGAAATGC TGCGCAGCCA TGGCCTGGCG CTGGGCGGCG GCATGGACAA CGCCATCGTC
ATGGACGACT ACAAGGTGCT CAACAGCGAC GGCCTGCGCT ACGACGACGA GTTCGCCAAG
CACAAGATCC TCGACGCCAT CGGCGACCTG TACCTGATCG GCAGGCCGCT GCTGGCCGCC
TACAGCGCCT TTCGCTCGGG CCACGGCATG AACAATCAGT TGCTGCGTGC CCTGCTGGCC
CAGCCCGACG CCTGGGAACT GGTCAGCTTC GACAGCGAGC GCCAGGCACC CAAGGGCTTC
GCCCAGCCCG CGCGGGCCTG GTGA
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| Protein sequence | MLQQRTIKTI TRAVGVGLHS GQRVELTLRP AQPDTGIVFR RVDLPEPVDI PISAEAVTDT
RMASTIGTGG AKVHTVEHLM SAIAGLGLDN IYIDITAEEV PILDGSSASF VFLLQSAGIE
LQKAPKRFIR VIRPVEVREG EGQNLKWARF DPYHGFKLRF EIDFAHPAVD STGQCVEFDM
GEDNYTRDIA RARTFGFTKD VEMLRSHGLA LGGGMDNAIV MDDYKVLNSD GLRYDDEFAK
HKILDAIGDL YLIGRPLLAA YSAFRSGHGM NNQLLRALLA QPDAWELVSF DSERQAPKGF
AQPARAW
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