| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1473 |
|---|
| Symbol | |
|---|
| ID | 5747029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1650360 |
|---|
| End bp | 1651160 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641296553 |
|---|
| Product | polypeptide-transport-associated domain-containing protein |
|---|
| Protein accession | YP_001562502 |
|---|
| Protein GI | 160896920 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1589] Cell division septal protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.132552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACT CCCTGCCGGC CCCCTTCGAC GTCAAGCTCA TGAACGTGAC CGCCACGGTC
CTGTTCGTGG GCGTGGCTGC GCTGGGGCTG GCAGCGGTGA GCTGGTGGGC GCTGCGCCAC
CCGGCCTTCA ACATCGGCCG CATCGTGGTC GAGGGCGAGC TGGTGCACAA CAACACGGTG
ACGCTGCGCG CCAACGTGGC GCCCGTGCTC ACCGGCAACT TCTTCACCGT GGACCTCAAG
GGCGCCAAGG CGGCATTCGA GCAGGTTCCC TGGGTGCGCG AGGCGCAGGT GCGCCGCGAC
TATCCCAACA GCCTGCGCGT CATCCTGCAC GAGCATGTGG CCGAGGCCTT CTGGGGCCCC
GATTCGGGCA CCGGCCTGGT CAACAGCTTT GGCGAGGTCT TCGAGGCCAA CCTGGGCGAG
CTCGACCGCG ACGGCCTGCC GCGCCTGCAG GGCCCCGAGG ACAGCGCCCC GCAGATGCTG
CAGATGTACC GGCTGCTGGT GCCGGCCCTG GGGCCGCTGG ATGTGGAGAT CGACGGGCTC
ACGCTCAATG CGCGCGGAAG CTGGCAGCTC AGGCTGGCCA ATGATGCACA GATCGAACTG
GGTGGCGGCA GCGTGGAAGC CGTGCTGCAG CGCGTGCAGC GCTTCGTGCG CACGCTGCCC
CAGATCACGA CCCAATACAA GCGCAAGGCC GACGCCATCG AGTCGGCCGA CCTGCGCTAC
GAAGACGGAT ATGCGCTGAG GCTGCGCGGT GTGACCACCG GCACGGCCAA GGCGCCGGCT
GCAGTGCGTC CCCGACGCTG A
|
|---|
| Protein sequence | MSYSLPAPFD VKLMNVTATV LFVGVAALGL AAVSWWALRH PAFNIGRIVV EGELVHNNTV
TLRANVAPVL TGNFFTVDLK GAKAAFEQVP WVREAQVRRD YPNSLRVILH EHVAEAFWGP
DSGTGLVNSF GEVFEANLGE LDRDGLPRLQ GPEDSAPQML QMYRLLVPAL GPLDVEIDGL
TLNARGSWQL RLANDAQIEL GGGSVEAVLQ RVQRFVRTLP QITTQYKRKA DAIESADLRY
EDGYALRLRG VTTGTAKAPA AVRPRR
|
|---|
| |