Gene Daci_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1467 
SymbolmraY 
ID5747023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1642468 
End bp1643646 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content65% 
IMG OID641296547 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_001562496 
Protein GI160896914 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.103298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGA TGCTGTCCCA ATGGCTGCAG GGCCTGTCCC CCGAGTTCGG CTTTCTGCGC 
GTCTTCCAGT ACCTCACGAT GCGCGCCGTG ATGGCCGCGC TCACGGCCCT GGTCATCGGA
CTGCTGGCCG GGCCGCGCCT GATCCGCATG CTGACCTCGC TCAAGATCGG CCAGCCCGTG
CGCGGCTACG GCATGGAGAC CCATCTGGCC AAGAGCGGCA CGCCCACCAT GGGCGGGGCG
CTGATCCTGC TGTCCATTGC CGTTTCCACG CTGCTGTGGT TCGACCTGTC CAACCGCTTC
GTCTGGATCG TGCTGCTGGT CACGCTGGGC TTTGGCACCA TCGGATGGGT GGACGACTGG
CGCAAGGTGG TCAACAAGGA CCCCGAAGGC ATGCGCTCGG GCGAGAAGTA TTTCTGGCAG
TCCGTCATCG GCCTGCTGGC CGCGCTGTAC CTGGTGTTCT GCATTTCCGA GAACTCCAAT
GCCCAGGTCT TCGAGCTGTT CGTCACCTGG GTGCAGTCCG GCTTTGCGCT GGACCTGCCG
CCCAAGGCGG GCCTGCTCGT GCCTTTCTTC AAGGAAGTCA GCTACCCGCT GGGCGTGCTG
GGCTTCGTGA TCATGACCTA CCTGGTCATC GTGGGCGCCA GCAACGCCGT GAACCTGACC
GACGGGCTGG ACGGCCTGGC GATCATGCCC GTGATCATGG TGGGCTCGGC CCTGGGCATC
TTCGCCTACG TCACCGGCAA TGCCGGCTAC GCCAAGTACC TGCTGTTCCC GCACATCCCG
GGTTCGGGCG AGCTGCTGGT GTACTGCGCG GCCATGGCCG GCGCGGGCCT GGCCTTCCTC
TGGTTCAACG CCCACCCGGC CCAGGTGTTC ATGGGCGACG TGGGGGCGCT GGCGCTGGGC
GCCTCGCTGG GCACCATTGC CGTCATCGTG CGCCAGGAAA TCGTGCTGGC CATCATGGGC
GGCATCTTCG TGGTGGAGGC GCTGTCGGTG ATGCTGCAGG TCACCTGGTT CAAGTTCACC
AAGAAGCGCT ATGGCCAGGG ACGCCGCCTG CTCAAGATGG CGCCGCTGCA CCACCACTTC
GAAAAGAGTG GCTGGAAGGA GACCCAGGTC GTGATCCGCT TCTGGATCAT CACCATGCTG
CTGTGCCTGC TGGGCCTGTC CACGCTGAAG CTGAGGTGA
 
Protein sequence
MLLMLSQWLQ GLSPEFGFLR VFQYLTMRAV MAALTALVIG LLAGPRLIRM LTSLKIGQPV 
RGYGMETHLA KSGTPTMGGA LILLSIAVST LLWFDLSNRF VWIVLLVTLG FGTIGWVDDW
RKVVNKDPEG MRSGEKYFWQ SVIGLLAALY LVFCISENSN AQVFELFVTW VQSGFALDLP
PKAGLLVPFF KEVSYPLGVL GFVIMTYLVI VGASNAVNLT DGLDGLAIMP VIMVGSALGI
FAYVTGNAGY AKYLLFPHIP GSGELLVYCA AMAGAGLAFL WFNAHPAQVF MGDVGALALG
ASLGTIAVIV RQEIVLAIMG GIFVVEALSV MLQVTWFKFT KKRYGQGRRL LKMAPLHHHF
EKSGWKETQV VIRFWIITML LCLLGLSTLK LR