Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1465 |
Symbol | murE |
ID | 5747021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1639536 |
End bp | 1641065 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641296545 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
Protein accession | YP_001562494 |
Protein GI | 160896912 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCCT CCCAAGCCCT GCGGGTGCTG TCCACGGCCA CCGAGGCTGT CCAGTGGCTG GCCGCCCGCC TGCAAGGCAG CGGCACGCTG CAGACCGACA GCCGCAAGGT CCGGCCCGGC GACGCCTTCA TCGCCTGGCC CGGCGGGGCC ACCGATGGCC GCGCCCATGT GGCCTCGGCC CTGGAGCGCG GTGCCATGGC CTGCCTGGTC GAAGCGCAGG GTGTCGAAGC CTTCGGTTTT TCCGGCGAGC ACATCGCGGC GCTGCCCGGC CTCAAGGCCG CCACGGGCCT GATCGCCGAC CAGTGGTTCC AGCACCCCAG CGCCCAGATC GACGTGCTGG CCGTGACCGG CACCAATGGC AAGACCACCA CCGCCTGGTG GCTGGCGCAC GCGCTGGCCC AGGTGAAGCT GCAGGAACGC AGCGGCTGCG CCCTGGTGGG CACGCTGGGC GTGGGCATTC CGCCCGCCAT GGAATCCACG GGCATGACCA CGCCCGACCC GGTGCGGCTG CAGCGCGCGT TCCGCGAGTA CGCCGATGCG GGCCTGGCGG CCTGCGCCAT CGAGGCCTCG TCCATCGGCA TCGTCGAGCA CCGGCTGGAC GGCACGCGCA TCCGTGTGGC GCTGTTCACC AATTTCACGC AGGACCACCT CGACTACCAC GGCAGCATGC AGGCCTACTG GGATGCCAAG GCCGCGCTGT TCGACTGGCC CGGCCTGCAG GCCGCCGTCG TCAATGTGGA CGACGCGCAT GGCGCACGCC TGTGGGCCAC GCTGCAGTCG CGCAAGCAGC CTGCCGCGCT CGACGTCTGG AGCATTTCCA TCGAAGGCGC GGCGCGCCTG CAGGCCAAGG ACATTGCGCT GGGTGCCGAG GGCCTGAGCT TCACCGTGAT CGAGGCCGGC CACAGCCTGC GCATGCACAC GCGCATGGTG GGTCAGTACA ACGTATCCAA CCTGCTGGGC GTGCTGGCCG CGCTGCGCTG CCTGGGCCTG ACCCTGGACC AGGCCGTCGC CGCCTGCGTC CACCTGGAGC CCGTGCCCGG CCGCATGCAG CAGATCGTCC AGCCCGGCCA GCCGCTGGTG GCCGTGGACT ACGCCCACAC GCCCGATGCG CTGGACAAGG CCCTGCGCGC CCTGCGCCCG GCCGCCGAGC AGCGCCGTGG CCGGCTGTGG TGCGTGTTCG GCTGCGGCGG CGACCGCGAT GCCACCAAGC GGCCGCTCAT GGGGCAGGCC GCCCAGAAGA ATGCCGACTG TGTGCTGGTC ACCAGCGACA ACCCGCGCAG CGAAGTGCCC GACCGCATCA TCGACCAGAT CCTGGCCGGC ATGCAGCCGG GCGAGAACCT GCAGTCCCAG GCCGATCGCG CAGCGGCCAT CGCCCAGGCG ATTGCGCACG CCAGCGAACG CGACGTGGTG CTGATCGCCG GCAAGGGACA TGAGGACTAC CAGGAGACGG CGGGCCAGCG CCATCCGTTC TCCGACATGG CCGAGGCGCA CAAGGCGCTG GCGGCCCGCG AAGGAAAGAA GCGGTCATGA
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Protein sequence | MSSSQALRVL STATEAVQWL AARLQGSGTL QTDSRKVRPG DAFIAWPGGA TDGRAHVASA LERGAMACLV EAQGVEAFGF SGEHIAALPG LKAATGLIAD QWFQHPSAQI DVLAVTGTNG KTTTAWWLAH ALAQVKLQER SGCALVGTLG VGIPPAMEST GMTTPDPVRL QRAFREYADA GLAACAIEAS SIGIVEHRLD GTRIRVALFT NFTQDHLDYH GSMQAYWDAK AALFDWPGLQ AAVVNVDDAH GARLWATLQS RKQPAALDVW SISIEGAARL QAKDIALGAE GLSFTVIEAG HSLRMHTRMV GQYNVSNLLG VLAALRCLGL TLDQAVAACV HLEPVPGRMQ QIVQPGQPLV AVDYAHTPDA LDKALRALRP AAEQRRGRLW CVFGCGGDRD ATKRPLMGQA AQKNADCVLV TSDNPRSEVP DRIIDQILAG MQPGENLQSQ ADRAAAIAQA IAHASERDVV LIAGKGHEDY QETAGQRHPF SDMAEAHKAL AAREGKKRS
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