Gene Daci_1455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1455 
Symbol 
ID5747011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1628423 
End bp1629520 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content70% 
IMG OID641296535 
Productintegrase family protein 
Protein accessionYP_001562484 
Protein GI160896902 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGAG CATCGGACAG GGACGGGCTC CCGGAAGGCG ACATTCCGGC GGAGGATCTG 
GCGGCAGAGA ACCTGGCGCT GCTCCCCGCC GCCGTCCATG CCTATCTCGA GCATGTGCGC
GTGCAAAAGC GCCTGGCCGA CCGCACCTGC GCACTCTATG CGCTGGACAT GGCCCGGCTT
TGCACCATGG CCCGCGACGC CGGCCAGGAG TTGCTGGCGC TGCAGCCCGC CCACATCCGC
CGCTTCGTGG CCCAGATGCA TTCCCGGGGC CGCAGCCCGC GCGGCATTGC GCTCATCCTG
TCTGGCTGGC GCAGCTTCTT CCGCTGGGCA GCCCAGCAAT CGCTGGTGCC CTTCAATCCC
GTCGAGGGCG TGCGCGGTCC CAAGGCCCCC AAACCCCTGC CCAAGGCATT GGGCGTGGAT
GACGCCGTGC AGCTGGCCGC CTTCAGCAAC GCCGAAGCCG ATCCCTGGAT CGAGGCACGT
GACGCCGCCA TCACCGAACT GCTCTACAGC TGCGGCCTGC GCGTGGGCGA GCTGGTGGGC
CTGGACGTGG CGCCCGGCCA GGACACGCAG CGCCAGGGCC GTGGCTGGAT AGATTTGCAG
GCCGCCGATG CCCATGTGCA GGGCAAGGGC GGCAAGCGGC GCACCGTGCC CGTGGGCGCC
GCCGCGCTGC AGGCGCTGCA GCGCTGGCTG GCCTTGCGGG AGACAGGCCT GGCTGGCGCG
GCCGCGCTGG CTGCGCATCA CGAATCCGCA CTTTTCATCG GCCGGCGCGG CGAACGCCTG
GGCGCGCAGT CGGTCTGGAC CCGGCTGCGA CAGCGCGGCC AGCAGGCCGG CCTGTCGGCC
GGCGTCCATC CCCATGTGCT GCGGCATTCG TTTGCCAGCC ACATGCTGCA GTCCAGCGGC
GACCTGCGCG CCGTGCAGGA ATTGCTGGGC CACGCCAGCA TCTCGACCAC GCAGATCTAC
ACGCGCCTGG ATTTCCAGCA TCTGGCCCAG GCCTACGAGA ACGCCCACCC ACGCGCGCGG
CGCCAGAGTG GGGGCGGCAG CGACAGTGGC GATGGCGATG GCAATGGAGA TAACGATGAA
AAGGGCCGCC CCCGATAA
 
Protein sequence
MPGASDRDGL PEGDIPAEDL AAENLALLPA AVHAYLEHVR VQKRLADRTC ALYALDMARL 
CTMARDAGQE LLALQPAHIR RFVAQMHSRG RSPRGIALIL SGWRSFFRWA AQQSLVPFNP
VEGVRGPKAP KPLPKALGVD DAVQLAAFSN AEADPWIEAR DAAITELLYS CGLRVGELVG
LDVAPGQDTQ RQGRGWIDLQ AADAHVQGKG GKRRTVPVGA AALQALQRWL ALRETGLAGA
AALAAHHESA LFIGRRGERL GAQSVWTRLR QRGQQAGLSA GVHPHVLRHS FASHMLQSSG
DLRAVQELLG HASISTTQIY TRLDFQHLAQ AYENAHPRAR RQSGGGSDSG DGDGNGDNDE
KGRPR