| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1439 |
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| Symbol | |
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| ID | 5746994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1607626 |
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| End bp | 1609008 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641296518 |
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| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
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| Protein accession | YP_001562468 |
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| Protein GI | 160896886 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase
[TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.535279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTC CGTCCTTCAC CTCCAGCACC GCCATCGATT CGCTGCTGTT CCGCGACGCC
TTCGGCACCC CCGCCATGCG CGCCATCTTC GCCGACAGCG CGCTGGTGTC GCGCTACATC
GAGGTCGAGG TCGCGCTGGC GCGCGCCCAG GGCCGCTGCG GCGTGATTCC GGCCGAGGCC
GCACACGAGA TCGCGCAGCG CTGCAGCCTC GACGCGCTGG ACTTCGAGCT GCTGCGCAAG
GAAACCGACA TTGTCGGCTA CCCCATCCTG CCGCTGGTGC ACCAGCTGGT GAAACAGTGC
GGCGAGGCAG GCCGCTACAT CCACTGGGGC GCTACCACCC AGGACATCAT GGACACGGCC
ACCGTGCTGC AGGTGCGCGA TGCGCTGGAC CTGGTCGATG CCGACATCGC CGCGCTGCGC
ACCATCCTGG CCGACCTGGC AGAACGCCAC CGCGACACGC CCATGGCCGG CCGCACGCAC
CTGCAGCACG CCCTGCCCAT CACCTTCGGC TACAAGGCCG CCATCTGGCT GGCCATGTTC
GACCGCCATG CCCAGCGCCT GCAGGAACTG CGCCCGCGCG TGCTGGTGGG CCAGTTCGCG
GGGGCGGCAG GCACGCTGGC CTCGCTGAGC GGCCGGGGCC TGGAAGTGCA GCAATTGCTG
ATGGAAGAAC TGGGCCTGGG CGTGCCCGCC ACCACCTGGC ATGTGGCGCG CGACGGCCTG
GCCGAAGCGG TGAATTTCCT GGCCCTGGTC ACCGGCTCGC TGGGCAAGAT CGCCTACGAC
GTGATGCTGC TGTCCTCCAC CGAGTTCGGC GAGGTGTTCG AGCCCTTCGT CACGGGGCGC
GGCGCCAGCA GCACCATGCC GCAAAAGCGC AACGCCATCT CCAGCGAGCT GATGCTGGCC
GCCTCCAAGG CCGTGCGCCA GCATGCGGGC CTGATGCTGG ACGCCATGGT CCAGGACCTG
GAGCGCGCCA CCGGCCCCTG GCACGCCGAA TGGGTGGCCC TGCCCGAGAG CTTCGTGCTC
TCGGCCGGCG CCCTGCACCA GGCGCGCTTC ATGCTGGGCG GCCTCATCGT CGATCCCGAA
CGCATGGCCC GCAACCTGGA CATGACCGAC GGCCTGATCG TGGCCGAGGC CGTGATGATG
GGCCTGGCCC CGCACACGGG CCGCCAGCAG GCGCACGACA TCGTCTATGC CGCCTGCCGC
AGCGTCAACG CCGAGGGCGG CACGCTGGCC GATGCGCTGG CCCGCCTGCC CGAAGTCACG
GCCCATTTCG ACCGCGCGGC GCTGCAGCGC CTCACCGACC CGCGCAACTA CCTGGGCGAG
GCCCCGCAGA TGGTGGACCG CGCCCTTGCG CTGTCGCGCG CCCATACAGC CAGCGGCCGC
TGA
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| Protein sequence | MTLPSFTSST AIDSLLFRDA FGTPAMRAIF ADSALVSRYI EVEVALARAQ GRCGVIPAEA
AHEIAQRCSL DALDFELLRK ETDIVGYPIL PLVHQLVKQC GEAGRYIHWG ATTQDIMDTA
TVLQVRDALD LVDADIAALR TILADLAERH RDTPMAGRTH LQHALPITFG YKAAIWLAMF
DRHAQRLQEL RPRVLVGQFA GAAGTLASLS GRGLEVQQLL MEELGLGVPA TTWHVARDGL
AEAVNFLALV TGSLGKIAYD VMLLSSTEFG EVFEPFVTGR GASSTMPQKR NAISSELMLA
ASKAVRQHAG LMLDAMVQDL ERATGPWHAE WVALPESFVL SAGALHQARF MLGGLIVDPE
RMARNLDMTD GLIVAEAVMM GLAPHTGRQQ AHDIVYAACR SVNAEGGTLA DALARLPEVT
AHFDRAALQR LTDPRNYLGE APQMVDRALA LSRAHTASGR
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