Gene Daci_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1436 
Symbol 
ID5746991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1604189 
End bp1605145 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content67% 
IMG OID641296515 
Producthypothetical protein 
Protein accessionYP_001562465 
Protein GI160896883 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.779932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.517463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGAC GAGTGTTTGG CGCATGGATG TGCGCATCGG TCCTGATGAC GGGCGCAGCA 
TGGGCGCAGG ACAGCTATCC CAGCCGCCCC ATCAGCCTGG TCGTGCCCTA CGGCGCGGGC
GGCGTGACCG ACGTGGTGGC GCGTGCGCTG GCCCAGGGCA TGGGCAAGCA GCTGGGGCAG
ACCGTGGTGA TCGAGAACAA GCCCGGCGCA GGCGCGTCCA TGGGCGTGAT GGAGATGCGC
ACGGCCAAGC CCGATGGCTA CCGCCTGACG CTGGCGCCCG TGAGCATCTT CCGCCAGCCC
CACATCCAGA AGGTGCAGTA CGACCCGGTG CGCGATCTCA GCTACATCGC CACGTACATG
ACCTATGACT TCGTGCTGGC CGTGCCCCAG GACTCGCCGT TCAAGACGGT GCAGGACCTG
GTCGAGTTCG CCAAGAAGAA TCCGGGCGCC GTGGATTACG GCACGCCGGG CAAGTTCACG
GCCAACCACG TGGTGATGGC GCTGCTGGAG CAGGCCACGG GCGCACGCTT CACGCATGCG
CCCTTCAAGG GCGATGCCGA GGCGCTGAAT TCGCTGATGG CCGGCCACAT CAAGTCCGGC
GTGTACGCCA ACACGGTGCT GCCGTACCTG AGCTCGGGCA AGCTGCGCGC CCTGGCCTCG
GCCTCCGAGG TGCGGCCCGA GGCCTTTGCC AACGTGCCCA CGTTCCGCGA GGCCGGTTAT
GCCTTCGATG TGCCCTCGCC CCTGGGCATT GCCGGGCCGC GCGGCCTGCC GCCCGAGATC
GTGCGCAAGC TCGAAGCCGC CATCAAGGCC GCCATGGACG ACCCGGCCTT CCGCCAGGTC
GTCGGCAACT ACGGCGTGCG CACGCAGTTC CGCGGCAGCC AGGAGTACAC GGCGTTCGCC
AGGAAGGCGT TCGAGGACGA GAAGAAGATC GTGCAGAACA TAGGCCTGGA GGATTGA
 
Protein sequence
MQRRVFGAWM CASVLMTGAA WAQDSYPSRP ISLVVPYGAG GVTDVVARAL AQGMGKQLGQ 
TVVIENKPGA GASMGVMEMR TAKPDGYRLT LAPVSIFRQP HIQKVQYDPV RDLSYIATYM
TYDFVLAVPQ DSPFKTVQDL VEFAKKNPGA VDYGTPGKFT ANHVVMALLE QATGARFTHA
PFKGDAEALN SLMAGHIKSG VYANTVLPYL SSGKLRALAS ASEVRPEAFA NVPTFREAGY
AFDVPSPLGI AGPRGLPPEI VRKLEAAIKA AMDDPAFRQV VGNYGVRTQF RGSQEYTAFA
RKAFEDEKKI VQNIGLED