| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1421 |
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| Symbol | |
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| ID | 5746976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1580655 |
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| End bp | 1582352 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641296500 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001562450 |
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| Protein GI | 160896868 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.161335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACT GGATCTCCGC TGCGGGCATC TGCGCGCTGG CCCTCAGTCC GATGCTCGTC
CATGCACAGC CTGTGTCTGC GCGCGACCCC AACGACCAGA TCATCCGCGA ACAGCAGGAA
AAACTGCGCG AGGAAATGCT GCGCCGCTCC GCACCCGCCA GCATTGAATT CGAGCAACCC
GCTGCCGCAG CCGCAGGCAT GGAAGACCGA TTCCCCGAAG GCCTGCAGCC CCAGGGACCG
GCCTTTCCCA TTCATACCAT CAGGCAAGAT GGCATGGCGT TGCTGCCGGA GGCTGTCTTT
GCCAGGGTCA CCGCGCCCTT TGTCGGCCGC TCGATCGGGG TCGAACACAT CAACGTGCTG
CTGGAGCGGG TCAACCGGGC CCTGATCGCG GCGGGCTACA CCACCTCGCG TGCCTACGTG
GGCAACCAGA GCCTGCAGGA GGGCGTGCTG TCCCTTACCA TCGTGCCGGG CCGCATCGAG
CAATTGCTGT TCAACGGCAC CCCTGTCGGT CCTGGCGACG ATCAGGCTCC GGGCGTGCAT
CTGGCCCTTG CCATGAAGCA GGGCGACGTG CTGCGCCTGC GCGACATCGA GCAGTCGGTG
GACCAGTTCA ACCGCCTCAG GCGCAACAAC GTGCAGGTGC AGATCCGCCC GGGCACGCAG
CCGGGCGGCT CCATCGTCGA GTTCGTCAAC CGGGCGGGCC AGGCCGCGCG TTACAACGTC
TCGCTGGACA ATCAGGGCGC GGCCGCCACC GGCCGCCTTC GCGTGCAGCT GGGCCTGGAT
GCCGGCAATG TGCTGGGCCT GATGGAGTCG CTGGGCGCCG GCCTGACCAC CAGCACGGAA
ACCAACGCCC TGTATGGCAC CTTCTCCGTG CCCCTGGGCT ATGCCACGCT GTCGGCAATG
GCTTCCGTCT CGGAATACCA GAACCTCATT GGCGACACCG CCCTGGTCCA CGGCACATCG
AAGACCTACA CGCTGTCGCT GAGCCGCCTG CTGCAGCGCG ACCAGAACAG CAAGACGGCC
ATGGACCTGA GCTTCTCGCA CCGCAAGTCC GAGCGTTCCG TCAACAACAT CTCGCTCAGC
CCGCAGACCC AGGCCGTGCT GCGCCTGGGC ATCAACCGCC TCACGCGCTT TCAGGCCGGC
GAGGGGCTGG GCCAGTGGAC GGTGGATGCG GGCATCTCGC GCGGCATGCC CTGGCTGGAC
ACCAACCGCG ACCCGGCCGA CCTGCCCCGG GAGGCCGCCC GCTACCGGTT CACCAAGCTG
GAGCTGTCGG CATCGGTGGA GCGGCCGTTG GGCAGCCTCC TGACCTGGCG CTCGCGTGCG
TTGGGCCAAT GGAGCCGGCA TCCGTTGTAC TCGTCCGAGC AGATCTTCGC CGGAGGCGTG
GGCAGCGTGC GCGGATTTCC CGAATCGTCC GTTGGCGGCG ACAAGGGCAT GGTCTGGCGC
AATGAATGGG CGTTGCAGCG GCCGCCTCAG ATCCTGGGCG GGCAGATCCG CTACGAGCCT
TACCTGTTTG TGGATGCGGC GCGGCTGTCC ACCGTTGCAG ACAGCCGCTC ACATGCCCTG
GCCAGCGCGG GAGGCGGGCT GCGCATCGCC TTCGCGGGCG GCTTCGCCGA GTTGATCGCG
GGCAAGCCGT TGCGCACACC CAGTGAAATG CCCAAGCCCG GCTGGCGTGT CAATGCCAGC
CTGGCCTACC AGTTCTAG
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| Protein sequence | MSHWISAAGI CALALSPMLV HAQPVSARDP NDQIIREQQE KLREEMLRRS APASIEFEQP
AAAAAGMEDR FPEGLQPQGP AFPIHTIRQD GMALLPEAVF ARVTAPFVGR SIGVEHINVL
LERVNRALIA AGYTTSRAYV GNQSLQEGVL SLTIVPGRIE QLLFNGTPVG PGDDQAPGVH
LALAMKQGDV LRLRDIEQSV DQFNRLRRNN VQVQIRPGTQ PGGSIVEFVN RAGQAARYNV
SLDNQGAAAT GRLRVQLGLD AGNVLGLMES LGAGLTTSTE TNALYGTFSV PLGYATLSAM
ASVSEYQNLI GDTALVHGTS KTYTLSLSRL LQRDQNSKTA MDLSFSHRKS ERSVNNISLS
PQTQAVLRLG INRLTRFQAG EGLGQWTVDA GISRGMPWLD TNRDPADLPR EAARYRFTKL
ELSASVERPL GSLLTWRSRA LGQWSRHPLY SSEQIFAGGV GSVRGFPESS VGGDKGMVWR
NEWALQRPPQ ILGGQIRYEP YLFVDAARLS TVADSRSHAL ASAGGGLRIA FAGGFAELIA
GKPLRTPSEM PKPGWRVNAS LAYQF
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