Gene Daci_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1400 
Symbol 
ID5746955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1557743 
End bp1558756 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content69% 
IMG OID641296479 
Producthypothetical protein 
Protein accessionYP_001562429 
Protein GI160896847 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACGC GCAATCCCGC ATCCCCGGCA CGCCCCACGC GGCGCAGCGT TCTGGCCCTG 
GCCGCAGCCC CGCTGCTGGC CGGCATGGCC GGCGGCGCCC TGGCCGAGAC CGGCTGGCCC
AGCAAGATGC TGCGGCTGGT CGTGCCCTTC CCGGCGGGCG GCCCCACCGA CACGGCATCG
CGCATCGTGG GCCAGAAGCT GGGCGAGCGT CTCAAGCAGA CCGTGGTGGT GGAAAACCGC
CCTGGCGCCT CCGGCTCCAT CGCGGCCGTG CAGGTCGCCA AGAGCCCGGC CGACGGCTAC
ACGCTGATGA TGCTGGCCAC GCCCACGCTG CTGGCGCCGC ACCTGTACAA GAAGGCCGGC
TACGACACCG TCAAGGACTT CACGCCCGTG GCCACGGTCT ATGACCTGCC CATCGTCATC
GTGGTCAACC CCACGCTGCT GCCCGACGTC ACCGACCTCA AGAGCCTGAT CGCCCACGCC
AAGGCGCAGA AGGTCGCGCT CAACTACACC AGCTCGGGCG CCGGCAGCTT CGGCCACCTG
AGCATGGAGC TGCTCAAGCA GATGGCCGCC TTCGACATGC AGCACGTGCC CTACAAGGGC
GGCGTGCCCG CCATCACCGA CACCATCGGC GGCCAGGTGC CCATCATGTA TGCCGACCTC
GTGGCCGCGC TGCCCCACAT CCAGGCCGGC AAGCTGCGCG CCATCGCCGT GGGATCGCCC
CAGCGCGTGG CCATGCTGCC CGACACCAAG ACCATTGCCG AGCAGGGCAT CAAGGGCTAC
GACGCCGTCT CCTGGGGCGG CCTGCTGGCG CCCAAGGGCA CGCCTAAGGC CGTGGTCGAC
CGCATCGCCA GCGAAGTGCA GCAGATCCTG GCCGACAAGG ACATCCAGGA AAAGCTGCTC
AACGCAGGCG CCATCGCCGC ATACCAGAAT CCCGCCCAGC TGGGCCAGCG CATCCAGCAG
GACTACACGC GCTGGGGCCA ACTGATCCGC GACAAGGGCA TTGCAGTGGA GTGA
 
Protein sequence
MYTRNPASPA RPTRRSVLAL AAAPLLAGMA GGALAETGWP SKMLRLVVPF PAGGPTDTAS 
RIVGQKLGER LKQTVVVENR PGASGSIAAV QVAKSPADGY TLMMLATPTL LAPHLYKKAG
YDTVKDFTPV ATVYDLPIVI VVNPTLLPDV TDLKSLIAHA KAQKVALNYT SSGAGSFGHL
SMELLKQMAA FDMQHVPYKG GVPAITDTIG GQVPIMYADL VAALPHIQAG KLRAIAVGSP
QRVAMLPDTK TIAEQGIKGY DAVSWGGLLA PKGTPKAVVD RIASEVQQIL ADKDIQEKLL
NAGAIAAYQN PAQLGQRIQQ DYTRWGQLIR DKGIAVE