Gene Daci_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1383 
Symbol 
ID5746938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1539921 
End bp1540898 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content69% 
IMG OID641296462 
Producthypothetical protein 
Protein accessionYP_001562412 
Protein GI160896830 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.5589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGAC GGCATCTTCT GGGCGGCGCT GCCGCCGCCC TGGCCACGGC CTTTCCTGCA 
CTGGCGCTGG CCCAGGGCGA ATGGCCGCAG CGGCCCGTGC GCCTGATCGT GCCGTTTCCG
CCCGGCGGCG GCACGGATGC CACCTCGCGC CTGGTGGCCG ACCGGCTCAA CCTCGCCATG
GGCTGGACCA TGGTCATAGA CAACAAGCCC GGCGCGGGCG GCAACATCGG CCTGGATGCC
GTGGCCAAGG CCGCGCCGGA CGGCTACACC ATCGGCATGG GGCAGGCCGC CAACCTGGCC
ATCAATCCCA GCCTCTACGC CAAGATGCCC TTCGATGCGC TCAAGGACTT CACGCCCATC
GCCAGCGTGG CCCTGCAGCC CGTGGTGCTG ACCGTGCGGC GCGACTCGCC CTTCAAGAAC
CTGCAGGACT TCATCAAGGC GGCCAAGGCC AGGCCCGGCA CCTACGGCAT CGCCCAGGCC
GGCAATGGCA CGGTAGGCCA CCTGGCGGGG GAAATGCTGG CACGCCGCGC GGGCATCGAG
GTGCTGCAGG TGCCCTACAA GGGCGCCAAT ACCGCGCTCA CCGACCTGAT GGGCGGGCAG
GTGGACCTGT ACTTCGGCAA CACGGTGTCG GTGATGTCGC AACTGGCCAC GGGCAAGATC
CGTGCGCTGG CCGTCACCTC GGCCCAGCGC GTGCCGTCCC TGCCCGACGT GCCCACGGTG
GCCGAGCAGG GCTATCCGGG CTTCGAGGCC TCCACCTGGC TGGGCCTGGT GGGGCCGGCC
AACCTGCCCG CCCCCATCGC CGAGCGCATT GCCGACGCGA CCATGAAGCT GCTGGCCACC
AAGGAGGTCA AAGAGAAGCT GGCCCAGGAA GGCAGCATGG CCACGCCCGC CAATGGCGCG
CAGTTCGGCG AGTGGATTCG CAGCGAGCAC GCCAAATGGG GCAAGCTGAT CCGCGAGGGC
AAGTTCCAGA TCAACTGA
 
Protein sequence
MRRRHLLGGA AAALATAFPA LALAQGEWPQ RPVRLIVPFP PGGGTDATSR LVADRLNLAM 
GWTMVIDNKP GAGGNIGLDA VAKAAPDGYT IGMGQAANLA INPSLYAKMP FDALKDFTPI
ASVALQPVVL TVRRDSPFKN LQDFIKAAKA RPGTYGIAQA GNGTVGHLAG EMLARRAGIE
VLQVPYKGAN TALTDLMGGQ VDLYFGNTVS VMSQLATGKI RALAVTSAQR VPSLPDVPTV
AEQGYPGFEA STWLGLVGPA NLPAPIAERI ADATMKLLAT KEVKEKLAQE GSMATPANGA
QFGEWIRSEH AKWGKLIREG KFQIN