Gene Daci_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1350 
Symbol 
ID5746905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1503787 
End bp1505754 
Gene Length1968 bp 
Protein Length655 aa 
Translation table11 
GC content67% 
IMG OID641296429 
Productpeptidase S9 prolyl oligopeptidase 
Protein accessionYP_001562379 
Protein GI160896797 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCT CCCTTTTTCC CCTGCCGCTG CAACCCAGGA GGTCACCCTT GCCGACGTTT 
TCCCGACACC CCGCCATGGC CGCCCACATC CTCAACCTGG CACGGGATGC CAGCGCCGAT
GCGCAGGCTC CGCAGGCCTA TCCGATCAAG GACTTCTTCC GCAATCCGGA GCGCGGCTTC
TTCCGCCTGG CCGATGACGG AAGCATGCTG GGCTTCATGC AGCCCGTCAG CGTGGACGGC
TATCCGGCGC GAATGAACAT TCATGTGCAG GCGCTGGAGG GCAGCACCCC TGTGGGCGAG
CCGCGCCGCA TCACGGCCGA GACCGAGCGC GACATCAGCA ACTTCTTCTG GAAGGGCTCG
GATGTGGTGC TCTACCAGAA GGACTTCGGC GGCGACGAGA ACTTCCACGT GCTGGCGGTC
AACGCGCGCA GCGGCCAGGC CACCGACCTG ACGCCCTGGG ACGGCGTGCG CGCCAGCATC
GAGGACGACC TGGAAGACGA CCCCGACCAT GTGCTGATCA GCCACAACCA GCGCGATGCC
GAGGTCTTCG ACGTGTACCG CGTGAACGTG CACACGGGCG CGGCGCAACT GGTGGCGCAG
AACCCCGGCA ACATCGTCGG CTGGCAGACC GACCATGCGG GCCGCGTGCG GACCGCCGTG
GCCAGCGACG GCCTGAACAG CGCCCTGCTC TACCGCGACG ACGAGGCCGG CGAGTTCCAG
CCCCTGATCA CCACCGACTA CCGCACCAGC GTCAGCCCGG CCTTCTTCAC CTTCGACGAC
CAAAAGCTCT ACGCCCTGTC CAACCGGGGC CGCGACAAGC TGGCCCTGGT GGTCATCGAC
CCGGCCCGGC CTGACGAGGA AGAGGAAATC TTCGTGCCCG AGGAAGTCGA TCTGGGCGCG
GCGGCCTATT CGCGCAAGCG CCGCGTGCTG ACCCTGGCCG CCTACCAGAC CGACAAGCCG
CAGTACCGCT TCTTCGATGC CGAGACCGAA GCCCTCTACG GCCGGCTGGC TGCGCAGTTG
CCGGGCTACG ACTTCGCCAT CCAGGGCGCC AACCGCGCCG AGGACAAGTT CATCGTCGCC
GCCTTCAACG ACCGCACGCC GGGCGCGCGC TACATCTACG ACGCGGCCGC CGATGCGCTG
ACCAAGCTGG CCGACATCAA CCCGGCCATC CCCGAGTCCG CCATGTCGCG CGTGCAGCCC
GTCAGCTACA CCAGCCGCGA CGGCCTGACC ATCCACGGCT ACCTGACCTT GCCGGCCGGC
CGCGAGCCCA GGAACCTGGC CTGCATCATC AACCCGCACG GCGGCCCCTG GGCCCGCGAC
GGCTGGGGCT ACAACCCCGA GGTGCAGTTC CTCGCCAACC GGGGGTTCTG CGTGCTGCAG
GTGAACTTCC GGGGCTCCAC GGGCTATGGC CGCGCGTTCT GGGAAGCGGG ATTCGGCCAG
TGGGGCCTGA AGATGCAGGA CGACATCACC GATGGCGTGC ACTGGCTGAT CGACCAGGGC
ATTGCCGACC CTGCGCGCAT CGGCATCTAT GGCGGCAGCT ATGGCGGCTA TGCCACGCTG
GCCGGCGTGG CCTTCACGCC CGACCTGTAT GCGGCGGCCG TGGACTATGT GGGCGTGTCC
AACCTGTTCA CCTTCATGAA GACCATTCCG CCCTACTGGA AGCCGCTGCT GGACCAGATG
CACGCCATGG TGGGCGATCC CGAGCGCGAC AGGGAGCGCC TGGCCGCCAC CTCGCCGGCC
CTGCATGTGG ACCGCATCAA GGCGCCACTG TTCATCGCCC AGGGCGCGCG CGATCCGCGC
GTGAACAAGG ACGAGAGCGA CCAGGTGGTG AAGGCGCTGC GCGAGCGCGG CGTCGAGGTG
CAGTACATGG TCAAGGACAA CGAGGGCCAC GGCTTTCACA ACGACGAGAA CAAGTTCGAG
TTCTACGAGG CCATGGAGCA GTTCCTGGTC ACGCACCTCA AGCCCTGA
 
Protein sequence
MAGSLFPLPL QPRRSPLPTF SRHPAMAAHI LNLARDASAD AQAPQAYPIK DFFRNPERGF 
FRLADDGSML GFMQPVSVDG YPARMNIHVQ ALEGSTPVGE PRRITAETER DISNFFWKGS
DVVLYQKDFG GDENFHVLAV NARSGQATDL TPWDGVRASI EDDLEDDPDH VLISHNQRDA
EVFDVYRVNV HTGAAQLVAQ NPGNIVGWQT DHAGRVRTAV ASDGLNSALL YRDDEAGEFQ
PLITTDYRTS VSPAFFTFDD QKLYALSNRG RDKLALVVID PARPDEEEEI FVPEEVDLGA
AAYSRKRRVL TLAAYQTDKP QYRFFDAETE ALYGRLAAQL PGYDFAIQGA NRAEDKFIVA
AFNDRTPGAR YIYDAAADAL TKLADINPAI PESAMSRVQP VSYTSRDGLT IHGYLTLPAG
REPRNLACII NPHGGPWARD GWGYNPEVQF LANRGFCVLQ VNFRGSTGYG RAFWEAGFGQ
WGLKMQDDIT DGVHWLIDQG IADPARIGIY GGSYGGYATL AGVAFTPDLY AAAVDYVGVS
NLFTFMKTIP PYWKPLLDQM HAMVGDPERD RERLAATSPA LHVDRIKAPL FIAQGARDPR
VNKDESDQVV KALRERGVEV QYMVKDNEGH GFHNDENKFE FYEAMEQFLV THLKP