Gene Daci_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1341 
Symbol 
ID5746896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1495463 
End bp1496365 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content70% 
IMG OID641296420 
Productputative hydrolase 
Protein accessionYP_001562370 
Protein GI160896788 
COG category[R] General function prediction only 
COG ID[COG4757] Predicted alpha/beta hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAC ACCAACTCAG CAGCGATGGC GCCACGCTGG CGCTGCGCGT CTATACGCCC 
GCTGGCCCGC CGCGCGCCAG CGTGGTCATC GGCGGGGCCA TGGGGGTGCG CCAGGCCTTC
TACGAGGCCT TTGCCACCTG GCTTGCGGGC CAGGGCTATC GGGTGACCAG CTTTGACTAC
CGGGGCCATG GCGATTCCCT GCAAGGCTCT TTGCGCCAGG TGCGTGCCGA CCTGTGCGAC
TGGGCGCGCG ACTACGAGGC AGTCATCGCC CATGCCAAGG CGCAGCTGCC GGACCAGCCG
CTGTTCCTGA TCGGCCACAG CCTGGGCGCC CAGCTGCCGG GCCTGCTGCG CTCCCCGCAG
CTGGTGGACG GTCTTTTGAG CATTGCGGCC GGCAGCGGCT ACTGGCGTGA CAATGCGCCC
CGCCTCAAGC GCATGGTTCC CTATTTCTGG CATGTGCTGG TGCCCGTGGC CACGCGCCTG
TGCGGCTACT TTCCGGGCCG CCGCCTGCGC AAGGTGGGCG ACCTGCCGGC CGGCGTCATG
CTGCAGTGGC GCCGCTGGTG CCTGAACCCG CGCTACAGCG TGGGTGCCGA GGGCGAGGCC
GCCGCGCGCA GCTACGCCGC CGTGCGCTTT CCGGTGATGG CGCTGTCCAT GAGCGACGAC
GAACTCATGA CCTGGCGCGG CACCGAGCAC CTGTTCGCGC TCTACGCCAA TGCCCCCAGC
CGCATCGAGC GCATCGAACC CAAGGCCCTG AAGTTGCGGC GCATAGGGCA TTTCGGCTTC
TTCCGCGCCG ATATGCGCGA CGCGCTCTGG AGCCGGGCCG TGGACGTGTT CTCGGGCTGG
ACCAAGGCGC CGGCAGCCGC GGCCCACCCG CGCTTTTCCT CACCCGCAGA GTCGCCGGCT
TGA
 
Protein sequence
MEQHQLSSDG ATLALRVYTP AGPPRASVVI GGAMGVRQAF YEAFATWLAG QGYRVTSFDY 
RGHGDSLQGS LRQVRADLCD WARDYEAVIA HAKAQLPDQP LFLIGHSLGA QLPGLLRSPQ
LVDGLLSIAA GSGYWRDNAP RLKRMVPYFW HVLVPVATRL CGYFPGRRLR KVGDLPAGVM
LQWRRWCLNP RYSVGAEGEA AARSYAAVRF PVMALSMSDD ELMTWRGTEH LFALYANAPS
RIERIEPKAL KLRRIGHFGF FRADMRDALW SRAVDVFSGW TKAPAAAAHP RFSSPAESPA