Gene Daci_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1324 
SymbolslmA 
ID5746879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1475271 
End bp1475966 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID641296403 
Productnucleoid occlusion protein 
Protein accessionYP_001562353 
Protein GI160896771 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.892359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGT CTGAAGTTCT GTCGCCTTTA TCCGCTCCTG GCGCTGATGT CGTTTCCGAC 
GAAGCCGCCT CCGCTTCCGC CCCTACGCCT GCGCGCAAAC GCCCCAAACC CGGGGAGCGG
CGCGAGCAGA TCCTGCAGGC GCTTGCGGCC ATGCTGGAAA AGCCCGGCGC AGAACGCATC
ACCACGGCAG CGCTGGCGGC CCATCTGGGC GTCAGCGAGG CAGCCCTGTA CCGCCACTTC
GCCAGCAAGG CCCAGATGTT CGAAGGACTG ATCGAGTTCA TCGAGCAATC CGTCTTCACG
CTGGTGCAGC AGATCGTCGG GCGGGATGTG CCGGAGGAAG AGCGGCCCGC AGTGGATGGC
ATGCGCCAGG CCAGCCGCGT GATCTCCCTG GTGCTGCAGT TTGGCGAGCG CAACCCCGGC
ATGGTGCGCG TCATGGTGGG CGATGCCATC GTCTTCGAGC ACGAGCGCCT GCAGGCCCGC
ATGAACCAGT TCTTCGACCG CATCGAATCC ACGCTGCGCC AGTGCCTGCG CCCCGCCGCC
GGTGCGCTGG GCTCTTCCGC CCCGACGGTC GATGCCCAGG TGGCCGCCAG CGTGCTGACA
TCGTTCGCGC TGGGCCGCCT GCAGCGCTAC GCGCGCTCGG GTTTCCGCCG CCTGCCGACC
GAGCATCTGG AAGCCAGCCT GGCCTTAATG GTCTGA
 
Protein sequence
MSESEVLSPL SAPGADVVSD EAASASAPTP ARKRPKPGER REQILQALAA MLEKPGAERI 
TTAALAAHLG VSEAALYRHF ASKAQMFEGL IEFIEQSVFT LVQQIVGRDV PEEERPAVDG
MRQASRVISL VLQFGERNPG MVRVMVGDAI VFEHERLQAR MNQFFDRIES TLRQCLRPAA
GALGSSAPTV DAQVAASVLT SFALGRLQRY ARSGFRRLPT EHLEASLALM V