| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1289 |
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| Symbol | |
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| ID | 5746844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1435050 |
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| End bp | 1437164 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641296368 |
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| Product | glycyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_001562318 |
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| Protein GI | 160896736 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.708462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAT CGAATCTTCT TGTTGAACTG TTTGTCGAAG AGCTGCCCCC GAAGGCGCTG
CAAAAGCTGG GCGACGCCTT TGCCGGCGTG CTGTTCGAGC AGCTCAAGGC CCAGGGCCTG
CTGGCCTCCA GCGAAGCGCG CCTGACGGCC TATGCCTCGC CGCGCCGCCT GGCCGCCCAC
ATCACCGAAG TCCTGCCCCA GGCCGAGGAC AAGGCCGTGT CGCAAAAGCT CATGCCCGTC
TCCGTGGGCC TGGACGCCGA CGGCAAGCCC ACGCCCGCCC TGATCAAGAA GCTGGCCGCC
CTGGGTGCCG GCGAAGAAGC CGTTGCCGGC CTGACCCGTC AGGGCGAAGG CAAGGCCGAG
GCCCTGTTCC ACTCCTCCAC CGTGCGCGGC GTGATGCTGG CCGACGGCGT GCAAAAGGCG
CTGGACGAAG CCATTGCCAA GCTGCCCATC CCCAAGGTCA TGCGCTACCA GCTGGCCGAC
GGCTGGAGCA GTGTCCATTT CGTGCGCCCG GCCCATGGCC TGGTGGTGCT GCACGGCACC
GAGGTGCTGA TCGGCGTCAA GGCCCTGGGC CTGACGGCCG GCACGGCCAC GCATGGCCAC
CGCTTCGAGG CGGCGGTCGA TCCCGTGGTC ATCCGCTCCG CCGATGACTA CGCCGCGCAG
CTGCGCGAGG AGGGCGCCGT CATCGCCAGC TTCGCCGAGC GCCGTGCCGA GATCGCGCGC
CAGCTGCAGG CCGCTGCCGA GCGCCTGGGC GGCGGTGTCC GTCCCATCGA GGACGAGGCC
CTGCTGGACG AAGTCACGGC CCTGGTCGAG CGCCCCAATG TGCTGGTCTG CGAGTTCGAG
AAGGAATTCC TCGACGTGCC GCAGGAATGC CTGATCCTCA CCATGAAGGC CAACCAGAAG
TACTTCCCGC TGCTGGACGC CGCCGGCAAG CTGACCCACC AGTTCCTGGT GGTCAGCAAC
ATCAGCCCGC AGGATGCCAG CGCCGTCATC GGCGGCAACG AACGCGTGGT GCGCCCGCGC
CTGGCCGACG CCAAGTTCTT CTTCGACCAG GACCGCAAGA AGACCCTGGC CTCGCGCGTG
GAAGGGCTGG GCAAGGTGGT CTACCACAAC AAGCTCGGCA CCCAGGGCGA GCGCGTGGAG
CGCGTGCGCT CCATCGCCAA GAGCATTGCC CGCCAGCTGG GCGACACGGG CCTGGCCCAG
CAGGCCGACC TGGCCGCGCA ACTGGCCAAG ACCGACCTCG TGACCGACAT GGTGGGCGAG
TTCCCCGAGC TGCAGGGCAC CATGGGCCGC TACTACGCGC TCAACGACGG CCTGGACGTG
GCCGTGGCCG ATGCCATCGA GGACCACTAC AAGCCCCGCT TTGCGGGCGA CGAACTGCCG
CGCGGCAACG CCGGCGTGGT CGTGGCCCTG GCCGACAAGC TGGAAACCCT GGTCGGCATG
TTCGGCATCG GCAACCTGCC CACGGGCGAC CGCGACCCGT TCGCGCTGCG CCGCCATGCG
CTGGGCGTGA TCCGCATGCT GGTCGAGAAA GACCTGGCGC TGGATCTGGA AACCCTGCTG
GTCAGCGTGC TGCCGGCCTT CGGCGACAAG ATCGAGGACG CCACGCCCCA GCTGGCCGAC
TTCATCTACG ACCGCCTGGC CGGCAACCTG CGCGAGCAGG GCTTCTCGGC CCAGGAAGTG
GACTCCGTGC TGGCCCTGCG CCCGCAGCGC CTGTCCGACG TGCAAAAGCG CCTGGAAGCC
GTGCGCGCCT TCGGCGAGCT GCCCGAGGCA CCGGCCCTGG CCGCCGCCAA CAAGCGCGTG
GGCAACATCC TCAAGAAGGC CGACCAGGCC GTGCAGGCCC AGGTCGACGC GGCCGTGCTG
GCCGAGGTGG CAGAGAAGGA CCTGTACGCA GCCCTGCAAT CGGTGGCGCC CAAGGCGCAG
CAGCAGTTTG CTGCCGGCGA CTACACGGCC AGCCTGCAGA CCCTGGCCGC GCTGCGCGCC
CCGGTCGATG CCTTCTTCGA GCATGTGATG GTCAACGCCG AAGACCCGGC CCTCAAGGCC
AACCGCCTGG GCCTGCTGGC CACGTTGCAC GAAGCCATGA ACCGCGTGGC GGACCTTTCG
CGACTGGCCG CCTGA
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| Protein sequence | MNASNLLVEL FVEELPPKAL QKLGDAFAGV LFEQLKAQGL LASSEARLTA YASPRRLAAH
ITEVLPQAED KAVSQKLMPV SVGLDADGKP TPALIKKLAA LGAGEEAVAG LTRQGEGKAE
ALFHSSTVRG VMLADGVQKA LDEAIAKLPI PKVMRYQLAD GWSSVHFVRP AHGLVVLHGT
EVLIGVKALG LTAGTATHGH RFEAAVDPVV IRSADDYAAQ LREEGAVIAS FAERRAEIAR
QLQAAAERLG GGVRPIEDEA LLDEVTALVE RPNVLVCEFE KEFLDVPQEC LILTMKANQK
YFPLLDAAGK LTHQFLVVSN ISPQDASAVI GGNERVVRPR LADAKFFFDQ DRKKTLASRV
EGLGKVVYHN KLGTQGERVE RVRSIAKSIA RQLGDTGLAQ QADLAAQLAK TDLVTDMVGE
FPELQGTMGR YYALNDGLDV AVADAIEDHY KPRFAGDELP RGNAGVVVAL ADKLETLVGM
FGIGNLPTGD RDPFALRRHA LGVIRMLVEK DLALDLETLL VSVLPAFGDK IEDATPQLAD
FIYDRLAGNL REQGFSAQEV DSVLALRPQR LSDVQKRLEA VRAFGELPEA PALAAANKRV
GNILKKADQA VQAQVDAAVL AEVAEKDLYA ALQSVAPKAQ QQFAAGDYTA SLQTLAALRA
PVDAFFEHVM VNAEDPALKA NRLGLLATLH EAMNRVADLS RLAA
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