Gene Daci_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1282 
Symbol 
ID5746837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1426281 
End bp1427324 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content67% 
IMG OID641296361 
Product2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component 
Protein accessionYP_001562311 
Protein GI160896729 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID[TIGR03261] putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACA CCCTTGCCTC CCTGGGCCGC CGCCTCGCCA TTGCCTCTGC GGCGCTGACC 
GTCGCCTCCT TCGCACCCCT GGCCCACGCA GCCAAGACCG AGCTGCTGGT CTACAGCGCG
CTGGAGGCCG ACCAGATCAA GGCCTACAAG AGCGGCTTCG AGAAGGCCCA TCCCGAGATC
GAACTCAAGT TCGTGCGTGA CAGCACGGGC ATCATCACGG CCCGCCTGCT GGCCGAGAAG
GCCAATCCCC AGGCCGACGT GATCTGGGGC GTGGCCGCCA CCTCGCTGAT GCTGCTGGAC
AAGCAGGGCA TGCTGCAGCC CTACGCGCCC AAGGGCCTGG ACAAGGTGCG CGCCAACATG
CGCGATCCGC GCGCGCAGCC GACCTGGGTG GGCATGGACC TGTGGTCCTC GGCCATCTGC
TTCAACACCG TGGAGGCCGG CAAGCGCAAG CTGCCGGTGC CCGCCAGCTG GGCCGACCTG
GTCAGGCCCG AGTTCAAGGG CACGATCACC ATGCCCCACC CGGCCTCCAG CGGCACGGGC
TACCTGATGG TCGCCGCCTG GCTGCAGATC ATGGGCGAGG AAAAGGGCTG GGCCTACATG
GACGGCCTGC ACCAGAACAT GGGCGTGTAC ACGCACAGCG GCTCCAAGCC CTGCCGCCAG
GCGGGGGCCG GCGAGTTTCC CGTGGGCCTG AGCTTCGAGT ACCGCGCCAG CAAGACCAAG
AAGGACGGTG CGCCCATCGA CATCGTCTTC CCGCAGGAAG GCCTGGGCTG GGACGTGGAG
GCCACGGCCA TCCTCAAGAC CAGCAAGAAG CAGGAAGCCG CCAAGGCGCT GGCCGACTGG
GCCGTCACGC CAGAGGCCAA CAAGCTGTAT GCCGCCAACT TCGCCGTGCT GGCCTTGCCC
GAGGCGCAGG AGAAGCTGGA GTTCATCCCC GCCGATCTGG AAAAGCGGTT GGCGAAGAAC
GATTTCAACT GGGCCGCCGA TAACCGTGAC CGCATCCTGG CCGAGTGGAG CCGTCGCTAC
GAAGCCAAGG CAGAGAAAAA GTAA
 
Protein sequence
MRHTLASLGR RLAIASAALT VASFAPLAHA AKTELLVYSA LEADQIKAYK SGFEKAHPEI 
ELKFVRDSTG IITARLLAEK ANPQADVIWG VAATSLMLLD KQGMLQPYAP KGLDKVRANM
RDPRAQPTWV GMDLWSSAIC FNTVEAGKRK LPVPASWADL VRPEFKGTIT MPHPASSGTG
YLMVAAWLQI MGEEKGWAYM DGLHQNMGVY THSGSKPCRQ AGAGEFPVGL SFEYRASKTK
KDGAPIDIVF PQEGLGWDVE ATAILKTSKK QEAAKALADW AVTPEANKLY AANFAVLALP
EAQEKLEFIP ADLEKRLAKN DFNWAADNRD RILAEWSRRY EAKAEKK